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SCNpilot_cont_300_bf_scaffold_84_curated_90

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 89141..90196

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00035EB9F9 similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 351.0
  • Bit_score: 652
  • Evalue 2.80e-184
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJL77142.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 351.0
  • Bit_score: 652
  • Evalue 4.00e-184
putative ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 351.0
  • Bit_score: 651
  • Evalue 1.50e-184

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGACGTGGGACGTGGCGCTGATCCTCCTCACCGACGGCCTGGCCAACGGGGCCGTCTACCTGCTGGCCGGGCTCGGGCTGGTGCTGATCTTCTCGGTCACGCGGGTGGTGTTCGTGCCGTTCGGCGACATCGCGGCCTTCGCGGCGCTGTCGCTCGCGGCCTTCGAGACCGACCGCGTGCCGCCGACCATCGGCATGGTCGCGGTGCTGGCCGCGCTGGCATTGGCCACCGAGGTCGGCAGCCTGCTGCGCCGCGGCGAGGCCAAGCGCATCCCGAAGGCGGTGCTGATGTGGGGCGTGCTGCCAGCCATTCCGTGCGTGTTGGCGTGGCTGGCCGCGCGGCCCGGCGTGCCGGTGGCTGTGCACATCGCGGTGGCCGTGCTGCTGGTGGTGCCCATCGCGCCGCTGCTGGCGCGGGTGGTGTTCCAGCCGATCGCGGATGCGTCGGTGCTGGTGCTGCTGATCGTTTCGCTGGCGCTGCACTTCCTGCTGTCGGGGTTGGGCCTGCTGTTCTTCGGGCCTGAAGGTTCGCGCACCACGCCGCTGACCAGCGCTGTGTTCACACTGAGCGATGGTTTCACCGTCAGCGGGCAGGTGGTGCTGATGGTGGGAGCGGCCATCGTGCTGAGCGGGCTGTTCTTCCTGGTGTTCGAGCGCACGGTGGCCGGCAAGGCGCTGCGCGCCACGGCGGTGAACCGGGTGGGCGCGCGGCTGGTGGGCATCCGGCCAGTGCGCACGGCGCTGCTGGCCTACGGCTGCGCCTCGCTGCTGGCCGGGCTGATCGGCGTGCTGATCGCGCCGGTGACGACCATGTATTACGACTCGGGCTTCATCATCGGACTGAAGGCCTTCGTGGCCGCGATCATCGGCGGGCTCGTGAGCTACCCGATGACGGCCGTGGGCGCGCTCGCGGTCGGCGTGGTGGAGAGCTTTGCCTCGTTCTGGAGCGGCGCGCTGAAGGACGTGATCGTGTTCAGCCTGCTGATTCCGGTGCTCATGCTGCGCTCCTTCATGGCGGCGCACGCGGAAGAGGAAGAAGACGAGGTGGACCAATGA
PROTEIN sequence
Length: 352
MTWDVALILLTDGLANGAVYLLAGLGLVLIFSVTRVVFVPFGDIAAFAALSLAAFETDRVPPTIGMVAVLAALALATEVGSLLRRGEAKRIPKAVLMWGVLPAIPCVLAWLAARPGVPVAVHIAVAVLLVVPIAPLLARVVFQPIADASVLVLLIVSLALHFLLSGLGLLFFGPEGSRTTPLTSAVFTLSDGFTVSGQVVLMVGAAIVLSGLFFLVFERTVAGKALRATAVNRVGARLVGIRPVRTALLAYGCASLLAGLIGVLIAPVTTMYYDSGFIIGLKAFVAAIIGGLVSYPMTAVGALAVGVVESFASFWSGALKDVIVFSLLIPVLMLRSFMAAHAEEEEDEVDQ*