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SCNpilot_cont_300_bf_scaffold_506_curated_27

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 24192..24623

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=2 Tax=Variovorax paradoxus RepID=C5CXA5_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 143.0
  • Bit_score: 220
  • Evalue 1.10e-54
putative homoprotocatechuate degradative operon repressor HapR similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 143.0
  • Bit_score: 220
  • Evalue 3.50e-55
Putative homoprotocatechuate degradative operon repressor HapR {ECO:0000313|EMBL:AGU47430.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 143.0
  • Bit_score: 220
  • Evalue 1.60e-54

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGACAGCACGCTTGGCGCACCGCAACTTGCCGCGCTTGCTGCTGCAGGCCCGCGAATCCGTCATGGCCCACGTCCGACCGAACTTGCGCGAGCAGGCCCTCTCGGACCAGCAATGGCGCGTGCTGAGGGTGCTGGGCGAGCACGGCATGGTTGAAACGGGGAGGGTGGCGCGTGAAGCGTTCATCCTCGGTCCGAGCCTCACGGGGGTGTTGGCGCGCATGGAGCGCGACGGCTTGATCCAGCGCTCGCGTGACCCGGACGATCAGCGTCGCTCGGTGGTCGAGGCGACGACGGAGGGGCTGGCCTTGGTCAAGGTGCTTTCCCGCTCGATCGAGGCGCATTACGCAGGAATGGAGAAATCGTTGGGCAAGCAAAAACTCACGGCGTTGTATGCACTGTTGGATAAATTGATCGAACTGGAGAAGCCATGA
PROTEIN sequence
Length: 144
MTARLAHRNLPRLLLQARESVMAHVRPNLREQALSDQQWRVLRVLGEHGMVETGRVAREAFILGPSLTGVLARMERDGLIQRSRDPDDQRRSVVEATTEGLALVKVLSRSIEAHYAGMEKSLGKQKLTALYALLDKLIELEKP*