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SCNpilot_cont_300_bf_scaffold_174_curated_143

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 167482..169374

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0110 family n=1 Tax=Variovorax sp. CF313 RepID=J3CN70_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 630.0
  • Bit_score: 1204
  • Evalue 0.0
Type VI secretion protein, VC_A0110 family {ECO:0000313|EMBL:EJL75069.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 630.0
  • Bit_score: 1204
  • Evalue 0.0
type VI secretion protein, VC_A0110 family similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 630.0
  • Bit_score: 1165
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1893
ATGGACCCTCGGCTGCTGAGCCTGTACGAACAGGAGCTGCGCTACTTCCGCGAGAGCGCCTCGGAGTTCGCGCGCGCGTTCCCGAAGATCGCGCACCGCCTGGGCATCGAGGGGCAGGAAGTGGCCGACCCGTACGTGGAGCGGCTCATCGAGGCCACGGCATTTTTATCGGCGCGCGTGGGCCTGAAGCTCGATGCCGAGTACCCGCGCTTCACCGGCCACCTGCTCGACATCGTCTATCCGCACTTCCTCGCGCCGACTCCGGCGATGGTGGTCGTGTGCATCGCGCCCGACCCCGACGACGCGAACCTCGCGGCCGGGCCCACGCTGCCGCGCGGCAGCGGACTGCGTGCACGGCAAGCCGTGGGCCAGAACACGCATTGCGAGTTCCGCACCGCGAGCGCACTGCGGGTGTGGCCAGTGGAAGTGCAACGCGCGCAGTACTTCACCTATGCGCCCGACCTGCCGCTGAACACGCATCCGCAGTCGCGCGCCATTCGCGGCGGCCTGCGCATAGGGCTGCGCGCGACGGCCGGGCTGAACTTCAGCCAGATCGCGCTCGACGACCTGGTGCTGCACTTCGGCGGCGCGGAAGACGTGGCCTGGCAACTGCATGAGTGCGCGCTGGGCCAGCCGGTGGGCGTGCTGGTGCGGCCGCTGTCGCCGTCCGGCGCATTGCATGGCGCGGCGCAGAGCCTGCCGGCCAGCGCCATCGGCGCCGTGGGCTTCGAGGAAGACGAAGCGCTGCTGCCCGCCACGGCCACCGGCTTCTCGGGCTTTCGGCTGCTGCAGGAGTACTTCGCGTTTCCTCAGCGCTTCCAGTTCGCGCGCATCGGCGGCCTCAAGAGCGTGCTCGCGGCCATGCCAGTGGCCGACGTGGAGATCGTGCTGCTGTTCTCGCGCGGCGACGCGGCGCTGGAGAAGCTGGTGAGCGCCGACAACGTGCAGCTGCACTGCGTGCCGGCCGTCAACCTGTTCACCAAGCGGCTCGACCGCGTGCCCATGACCGAAGGCGTGAGCCAGTTCCACCTGGTGCCCGACCGCACGCGGCCGCAGGACTTCGAGGTGCACACCGTCACCGAGGTCATCGGCCACGGCACGCCCGGCACCGACGCGGCGGCGGCCGAGCAGCCGTTCCGGCCGTTCTACTCGGCCTTCCACGGCAGCCGGCTCAGCCACCCCGCCTACTTCACGACCACGCGCGAGCCGCGCATGCTGTCGGTGCGCCAACGCACCGAAGGCAACCGCAGCAGCCACATCGGCTCCGAGGTCTACATGCAGATCGTCGATCCGCAGCAGGCGCCGTACGCGGCCTCGCTGCGGCAGCTCGCGGTGACGGCGCTGTGCACCAACCGCGACCTGCCCCTCTTGATGCCGCTGGGCCGCGACAACGACTTCGACTGCGTCGACTCCTTCCCGGTGCAGCGCGTGCGCATGGTGCGCGGCCCTTCGCGGCCGGTGTCGCCGGTGGTGAGCCAGGGGCTGGGCTGGCGCGTGGTCGATCACCTCGCGCTCAACTACCTGTCGCTGTCCGACAGCACGCCGGAGCAGGGCGCGGCCGCGCTGCGCGAAACGCTGATGCTCTACGCGGTGCATGCCGACGAGATGCGCCAGGGCCAGGTGCGCGGCCTGCTGTCGGTCAAGAGCAAGCCCGTGGCGCGGCGGCTGCCGATGAAGGGGCCGATCGCCTTCGGGCGCGGGCTTGAAGTGACGCTGGAGGTCGACAAGGACGCCTTCCACGGCCACAGCGCGTTCCTCTTCGGCGCCGTGCTCGCGCGCTTTCTCGCGCGGCATGTCGAGGTCAATCATTTCGTCGAGACCGTGCTGCGCATCGCGGGCAGGGGCGAGACCATGCGCTGGAGGCCGCTGTGCGGGACGCGCCAGATTCTGTGA
PROTEIN sequence
Length: 631
MDPRLLSLYEQELRYFRESASEFARAFPKIAHRLGIEGQEVADPYVERLIEATAFLSARVGLKLDAEYPRFTGHLLDIVYPHFLAPTPAMVVVCIAPDPDDANLAAGPTLPRGSGLRARQAVGQNTHCEFRTASALRVWPVEVQRAQYFTYAPDLPLNTHPQSRAIRGGLRIGLRATAGLNFSQIALDDLVLHFGGAEDVAWQLHECALGQPVGVLVRPLSPSGALHGAAQSLPASAIGAVGFEEDEALLPATATGFSGFRLLQEYFAFPQRFQFARIGGLKSVLAAMPVADVEIVLLFSRGDAALEKLVSADNVQLHCVPAVNLFTKRLDRVPMTEGVSQFHLVPDRTRPQDFEVHTVTEVIGHGTPGTDAAAAEQPFRPFYSAFHGSRLSHPAYFTTTREPRMLSVRQRTEGNRSSHIGSEVYMQIVDPQQAPYAASLRQLAVTALCTNRDLPLLMPLGRDNDFDCVDSFPVQRVRMVRGPSRPVSPVVSQGLGWRVVDHLALNYLSLSDSTPEQGAAALRETLMLYAVHADEMRQGQVRGLLSVKSKPVARRLPMKGPIAFGRGLEVTLEVDKDAFHGHSAFLFGAVLARFLARHVEVNHFVETVLRIAGRGETMRWRPLCGTRQIL*