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SCNpilot_cont_1000_p_scaffold_1688_curated_15

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: comp(12979..13560)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 193
  • Evalue 2.60e-46
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 193
  • Evalue 3.60e-46
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 184.0
  • Bit_score: 155
  • Evalue 1.40e-35

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Taxonomy

uncultured Acidobacteria bacterium A11 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAGCGTCTTGCCGACTGATGCGGATATTTCCGCGATGCGTCGCCTTCGGGAGGGAGATGATCTGGCGCTCAACGAAATCATGGACCGATGGCAGCGGAGATTGACGAGCTATCTTCTTCGCGCCATTGGCAACGAGACCGTTGCCGTTGATCTTGCGCAGGAGACTTTCGTCCGCGTTTATCAGAGCCGGGAAAAATACCAACCCAAGGGCGAATTTTCGACTTGGCTTTTCGCCATCGCGACAAATCTCCTCCGGCAGCATTTTCGATGGCTCAAGCGCCATCCCACCGTTTCCATGGATTCCGTGGAGCCAGGCTGCGACGACCCGCCATTGAGCGCACATCTGCCCGCCGAAGATTCCAACAATGTCGAAAGGGACGAGAGAGCTAGGATCGTCAAGGACGCCGTTACGGCCCTGCCGCCTGAACTGCGGGAGGCTGTTCTGTTGTTTGAATACGAGGATCTGTCGCACGAGCAGATCTCCAAAATCGCAGGGTGCTCGAAGAAGGCGGTGGAAACCCGCCTCTATCGAGCCCGAGCCCTTCTGCGGGAAAAACTCCGGCACTGGCTGGCCTCCTGA
PROTEIN sequence
Length: 194
MSVLPTDADISAMRRLREGDDLALNEIMDRWQRRLTSYLLRAIGNETVAVDLAQETFVRVYQSREKYQPKGEFSTWLFAIATNLLRQHFRWLKRHPTVSMDSVEPGCDDPPLSAHLPAEDSNNVERDERARIVKDAVTALPPELREAVLLFEYEDLSHEQISKIAGCSKKAVETRLYRARALLREKLRHWLAS*