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SCNpilot_cont_1000_p_scaffold_1688_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1688_curated_1
unknown

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comp(169..447)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1688_curated_2
unknown

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969..1535
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1688_curated_3
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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1763..3025
DNA (1263bp) protein (421aa)
Outer membrane efflux protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IQ29_9BACT
Transporter {ECO:0000313|EMBL:AHF93373.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
outer membrane efflux protein
SCNpilot_cont_1000_p_scaffold_1688_curated_4
uncultured Acidobacteria bacterium A11, Acidobacteria, Bacteria

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3022..3804
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEH26516.1}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1688_curated_5
uncultured Acidobacteria bacterium A11, Acidobacteria, Bacteria

Not on your lists

3823..7011
DNA (3189bp) protein (1063aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEH26515.1}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;"
CzcA family heavy metal efflux protein; K07239 heavy-metal exporter, HME family
SCNpilot_cont_1000_p_scaffold_1688_curated_6
uncultured Acidobacteria bacterium A11, Acidobacteria, Bacteria

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7008..7442
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK3_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEH26514.1}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1688_curated_7
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7480..8121
DNA (642bp) protein (214aa)
Cation efflux protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQC1_SPHAL
cation efflux protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_cont_1000_p_scaffold_1688_curated_8
unknown

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8210..8332
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1688_curated_9

Not on your lists

8720..9037
DNA (318bp) protein (106aa)
RNA-directed DNA polymerase (EC:2.7.7.49); K00986 RNA-directed DNA polymerase [EC:2.7.7.49]
RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AUB2_9ZZZZ
Marine sediment metagenome DNA, contig: S01H1_S01273 {ECO:0000313|EMBL:GAF97203.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_1000_p_scaffold_1688_curated_10
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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9010..10146
DNA (1137bp) protein (379aa)
RNA-directed DNA polymerase (EC:2.7.7.49); K00986 RNA-directed DNA polymerase [EC:2.7.7.49]
RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AUB2_9ZZZZ
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
SCNpilot_cont_1000_p_scaffold_1688_curated_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10422..10949)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX80_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20878.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1688_curated_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(11152..11622)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRN6_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77684.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1688_curated_13
unknown

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comp(11715..11975)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1688_curated_14
uncultured Acidobacteria bacterium A11, Acidobacteria, Bacteria

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comp(12096..12935)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTJ6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEH26507.1}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;"
SCNpilot_cont_1000_p_scaffold_1688_curated_15
uncultured Acidobacteria bacterium A11, Acidobacteria, Bacteria

Not on your lists

comp(12979..13560)
DNA (582bp) protein (194aa)
RNA polymerase sigma factor n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK1_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_1688_curated_16
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(13557..13994)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPY5_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77706.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1688_curated_17
unknown

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comp(13991..14272)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1688_curated_18
unknown

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comp(14357..14608)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1688_curated_19
unknown

Not on your lists

15035..15457
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1688_curated_20
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15597..17630)
DNA (2034bp) protein (678aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper/silver-translocating P-type ATPase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QKA3_9BRAD
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:EIG60209.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_cont_1000_p_scaffold_1688_curated_21
unknown

Not on your lists

comp(17949..18386)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1688_curated_22
unknown

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18461..18799
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1688_curated_23

Not on your lists

18796..19254
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRM5_OPITP
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49163.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1688_curated_24

Not on your lists

19241..19720
DNA (480bp) protein (160aa)
RNA polymerase sigma factor n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK1_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48953.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RNA polymerase sigma-70 factor,ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Displaying 24 items

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