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SCNpilot_cont_1000_p_scaffold_1688_curated_24

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: 19241..19720

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 154.0
  • Bit_score: 102
  • Evalue 5.00e-19
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48953.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 155.0
  • Bit_score: 109
  • Evalue 3.30e-21
RNA polymerase sigma-70 factor,ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 157.0
  • Bit_score: 98
  • Evalue 2.20e-18

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 480
ATGGAGGCGAATGATGCCCACTCTGAGAATGATTGGGAAATTGCCCGCCGTGCGGCCAACGGCGATGAAGACGCTTATGCGTGCCTAATCGCGCGCTACCAAGCTCCGATCCATAGTTTTGTTTACCGCTCGGTAGGAAATGAAGAAACCTCCCTCGACATCACGCAGGAGGTGTTTGTCAAGGCATGGTTCGCTCTGGGGCGTGTCCGGGAAAAAGCGCGATTCTCGACTTGGTTGTTTCAGATTGCCGTCAATCTTTGCCGGGACCATGTAAAATCGAAGGCAAACCGCCAATCTCGGGTTACTTATTCCTTTGCTCGCGACGAACGGGATGAAAAGCCTGGCGAGCGGGAATTTGCCCATCCTGATCCTGCGCCAGATCGACAGGCCGAACTTTCCGAAAATGCCTCTGTGTTGGATGCGGAAATCCGCAATCTGCCCGGAGATTTGCGCCCGGCATTTTTGCTCGGAGCCGTCGAA
PROTEIN sequence
Length: 160
MEANDAHSENDWEIARRAANGDEDAYACLIARYQAPIHSFVYRSVGNEETSLDITQEVFVKAWFALGRVREKARFSTWLFQIAVNLCRDHVKSKANRQSRVTYSFARDERDEKPGEREFAHPDPAPDRQAELSENASVLDAEIRNLPGDLRPAFLLGAVE