ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RBG_16_scaffold_80553_curated_12

Organism: Deltaproteobacteria bacterium RBG_16_42_7

partial RP 31 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 7270..7545

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 id=3407529 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 86.0
  • Bit_score: 85
  • Evalue 2.80e-14
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 86.0
  • Bit_score: 84
  • Evalue 1.90e-14
Tax=RBG_16_Deltaproteobacteria_42_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 92.0
  • Bit_score: 175
  • Evalue 3.70e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_42_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
TTGAGGAAGAATAAATCGGCAATAAAAAAAACCAGGCAGTCTGAGGGAAAAAGATTGAGAAATTCTCATGTGAAGTCAACAATGAAAACCCGGATCAAAAAAGTCGTTAATTTGGTGGGAAGCAAAGAAACAGAGGATATAAATAGCCTTTTCAAGAATGCTATATCATATATAGACAAAGCCTCGTCAAAAGGCGTTATTCATAGAAACAACGCTGCAAGAAAAGTTTCAAGGCTTACGAAAAAGGTCAACAGCCTTTTACAGCCAAAAGGGTGA
PROTEIN sequence
Length: 92
LRKNKSAIKKTRQSEGKRLRNSHVKSTMKTRIKKVVNLVGSKETEDINSLFKNAISYIDKASSKGVIHRNNAARKVSRLTKKVNSLLQPKG*