ggKbase home page

RBG_16_scaffold_26467_curated_1

Organism: Deltaproteobacteria bacterium RBG_16_42_7

partial RP 31 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(3..2624)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 879.0
  • Bit_score: 1218
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta id=3619740 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 872.0
  • Bit_score: 1310
  • Evalue 0.0
  • rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 874.0
  • Bit_score: 1706
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_42_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2622
ATGGCAAAGGCGTTAGTAAGAAAAAATTTTGGACGGGTACAACATAGTATATTGCAGGTGCCCAATCTCATAGAAATTCAAAAACACTCTTTTGAACGTTTTCTACAAAAAGATATTTCCCCTGCTAAAAGAGAGGATATAGGATTACAGGCAGCTTTTACCTCTGTTTTTCCCATTGTTGATTATAATGAAACAGCATCTATTGAATTTATTGAATATATAATCGGGCAACCCAAGTATGACGTAAGAGAAAGCCTTCAAAAAGGCATCAATTATGCAACACCTCTCAAAATAAAGGTAAAACTCAATTTGTGGGAGAAAAGCGAATCTGGCAAAAAGAGATTAAGAGAGTCCAAAGAGGAAGAAGTCTATTTAGGAGAACTTCCCCTTATGACAGATACCAGTACTTTTATTATAAATGGTACTGAAAGAGTTGTTGTCAGCCAACTCCATCGTTCACCAGGGGTATTTTTCAGTCACGAAAAGGGGAAAAGTCTGAGCGGCAGGTCCCTCTATTCTGCCCGCATAATACCAGCGAGGGGATCATGGTTTGATTTTGAATTCGATTCGAAAGACACCCTTTATGTGAGAATAGACCGCCGGAAGAAACTGCCGGCAACAATAATTCTCAAGGCCCTTGGTTTTATGGATGAACAAATATTAACCACGTTTTATCCTATAGAGGAGATCACGATAAAAAACGGGATAGCCAGTCGCGTTGTCAGCGATGCCCTTCTTAATTTAAAGGCCCTGAGGAATATCATCATTCCAAAAACCAAAGAAATAGTCGTCAAAGAAGGCAGCAGAATAACAAAGGCTGCGCTTAGAAAATTAGAGACATTGGGCGTCAAGGAGATAGAAGTTTCAAAGGATGAACTGATTGGCAGGGTGACTTTAAGAGATATTATAGACCCTGATACAGGAGAAGTTATTCTGGAAGGCAATGAAGAAATTAACAGCAATGTTATGGAAAAAATAATATCTGCAAAAATTCCCAAGCTCCATTTACTTTTAATTGATGGCCTGCATTATCTTCCTTCTATAAGAGACACCCTGCTTATTGATAAAATTAAAGATACTGATGAAGCATTAATAGAAATATATAGAAAATTGAGGCCTGGGGAACCGCCTACAATGGCTGATGTAAAAGAACTATTTAACGGATTATTTTTCAATCCTAAGCGGTATGATCTCTCCCCCGTAGGAAGGCTAAAGCTCAATACACGTCTGGGGCTTGAAGTACCACTTGATATGCGGGTTTTAACAGACAAAGACATCATAGAAATAATTCGCTATCTCCTTAACCTCAGAGTGGGCCAGGGCGAAGTTGATGATATAGACCACCTCGGAAACAGGAGGGTCAGGTCCGTGGGAGAGCTTCTTGAAAATCAATTCAGGATAGGCCTTGTAAGAATGGAGAGGGCCGTAAAAGAGAAGATGACCCTGACAGAACTTGAGGAGCCGCAAGCCATGCCTCATGACCTTATAAATGCAAAGCCTGTTATTGCAGTTATAAAGGAATTCTTTGGCTCAAGCCAGTTAAGTCAATTTATGGACCAGACAAACCCCCTTTCCGAGATAACCCATAAAAGGAGATTAAGTGCCCTTGGTCCAGGAGGGTTAACGCGAGAAAGGGCAGGTTTTGAAGTAAGAGACGTGCATCCAACGCATTATGGCCGCATCTGTCCGGTAGAGACCCCGGAAGGTCCTAACATAGGTTTGATAACATCACTAGCGTCTTATGCAAGGGTTAATGATTTTGGTTTCATTGAGACGCCGTATAGAAAAATTAAAAATGGTAAGGTAACCGATGAAATAGAATATCTCTCTGCCATTGACGAATGGAAGTTTGTTATTGCACAGGCAACGTCTCCAGTTGATGGAAGAGGCTATCTTGCAGAGGAAGCAGTTTCTGTAAGAGTCGGTGGTGATTTTAAATTCGTTACACGCGAAGAAGTGCATTATATGGATGTTTCCCCCAAACAGATTGTGAGTATTTCTGCCTCTCTCATACCATTTCTTGAAAATGATGACGCAAACAGGGCACTGATGGGGTCAAATATGCAGAGGCAGGCGGTCCCCTTATTGCATACTGAAGCGCCGATTGTTGGAACAGGAATGGAGCATGTGGCTGCAAGAGACTCCGGCGTTATGGTAACCGCCAGGAGGGCTGGTACTATAGAATCTGTTGATGCCTCAAGAATTGTGGTAAAGTGTGAAGGGGGCGTGGATATATATAAGCCGATTAAGTTCTATCGCTCTAATCAGGGCACATGCATAAATCAGAAGCCGATTGTAAAAGCAGGTGAAGCGGTAAAGAAAGGGCAGGTTATTGCTGACGGTCCGGCAACAGCCCTTGGTGAGCTTGCTCTGGGGAAAAATGTCCTCGTTGCATTTATGCCATGGCAGGGATATAACTTTGAAGATGCCATCATCCTCAGTGAACGTCTTGTGAAGCAGGACACCTATACCTCCATACATATTGAAGAATTTGAGATAGAGGCAAGAGAGACAAAACTCGGGCCAGAAGAAATTACAAGGGATATTCCGAATGTGGGAGAAGAGATACTGCGCAACCTTGATGAAAGCGGGATCGTAAGGCTAGGGGCTGAGGTGAAACCG
PROTEIN sequence
Length: 874
MAKALVRKNFGRVQHSILQVPNLIEIQKHSFERFLQKDISPAKREDIGLQAAFTSVFPIVDYNETASIEFIEYIIGQPKYDVRESLQKGINYATPLKIKVKLNLWEKSESGKKRLRESKEEEVYLGELPLMTDTSTFIINGTERVVVSQLHRSPGVFFSHEKGKSLSGRSLYSARIIPARGSWFDFEFDSKDTLYVRIDRRKKLPATIILKALGFMDEQILTTFYPIEEITIKNGIASRVVSDALLNLKALRNIIIPKTKEIVVKEGSRITKAALRKLETLGVKEIEVSKDELIGRVTLRDIIDPDTGEVILEGNEEINSNVMEKIISAKIPKLHLLLIDGLHYLPSIRDTLLIDKIKDTDEALIEIYRKLRPGEPPTMADVKELFNGLFFNPKRYDLSPVGRLKLNTRLGLEVPLDMRVLTDKDIIEIIRYLLNLRVGQGEVDDIDHLGNRRVRSVGELLENQFRIGLVRMERAVKEKMTLTELEEPQAMPHDLINAKPVIAVIKEFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPVETPEGPNIGLITSLASYARVNDFGFIETPYRKIKNGKVTDEIEYLSAIDEWKFVIAQATSPVDGRGYLAEEAVSVRVGGDFKFVTREEVHYMDVSPKQIVSISASLIPFLENDDANRALMGSNMQRQAVPLLHTEAPIVGTGMEHVAARDSGVMVTARRAGTIESVDASRIVVKCEGGVDIYKPIKFYRSNQGTCINQKPIVKAGEAVKKGQVIADGPATALGELALGKNVLVAFMPWQGYNFEDAIILSERLVKQDTYTSIHIEEFEIEARETKLGPEEITRDIPNVGEEILRNLDESGIVRLGAEVKP