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RBG_16_scaffold_34104_curated_8

Organism: Deltaproteobacteria bacterium RBG_16_42_7

partial RP 31 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(5492..6064)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=3968154 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 189.0
  • Bit_score: 274
  • Evalue 8.70e-71
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 200.0
  • Bit_score: 144
  • Evalue 2.50e-32
Tax=RBG_16_Deltaproteobacteria_42_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 378
  • Evalue 7.80e-102

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Taxonomy

RBG_16_Deltaproteobacteria_42_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAGCAATAGTTCTGAGGACTTATCAATCATTGACAGATTCAAAAACAGCGATGAAGCAGTATTTGAAAAACTTATCCTTAAGTATCAAGACAGAATATATAATCTTTGCCGTCATATGCTCGGCAACGCGCATGACGCCGAGGATGCCGCGCAGGACACATTTGTTAAGGCCTACCGGAACCTGACAAAATTCAAACCCGAATCCTCCCTCTATACCTGGCTGTATCGCATTGCTGTAAATACTTGCCTTGACTATAAGAAAAGGCCGTTATTTGCATCTCTGTTCAGGAAATCTGACGAAGGAGACGAGCTTATCCGCGAGCATTCGTCCTCCTGGCCTTCGCCGGAAAGGCTTTATGAATCGAAGCAGATCGGGCTGGCGCTGCATGGCGGCATAAGAAAACTTTCCCCAAAGCTACGGACGGTAATCATACTGAAGGAAATAGAAGGGCTTTCATATGAAGGAATCGCGGACATTCTCGAAGTCTCCATAGGAACAGTCAAATCGAGGATTGCGAGGGCAAGGGACGACTTGAAAGTATTGCTTAAAGATTTTACGGAACAAAAATAA
PROTEIN sequence
Length: 191
MSNSSEDLSIIDRFKNSDEAVFEKLILKYQDRIYNLCRHMLGNAHDAEDAAQDTFVKAYRNLTKFKPESSLYTWLYRIAVNTCLDYKKRPLFASLFRKSDEGDELIREHSSSWPSPERLYESKQIGLALHGGIRKLSPKLRTVIILKEIEGLSYEGIADILEVSIGTVKSRIARARDDLKVLLKDFTEQK*