ggKbase home page

RBG_16_scaffold_56267_curated_5

Organism: Deltaproteobacteria bacterium RBG_16_42_7

partial RP 31 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(3235..3774)

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 151.0
  • Bit_score: 151
  • Evalue 1.90e-34
NAD-dependent epimerase/dehydratase id=4834388 bin=GWC2_Deltaproteobacteria_42_51 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 158.0
  • Bit_score: 272
  • Evalue 3.10e-70
Tax=RBG_16_Deltaproteobacteria_42_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 332
  • Evalue 2.70e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_42_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGATACTTCTTACCGGAGCAACAGGTTTTGTTGGCGGCAATCTGCTGAGAGAAATGCTTAAGCATGGGCTTCAGGTACGGTGTATTTCAAGAAACCCTTCAAGGGCGGAGACTATAAAGAAACCTGGAGTAGAACTGGTACAGGGCGACGTAACAGACAAAGACTCAATTGTAAAGGCGTTTGCAGATGGAAAGATAGACACAGCAGTTCATCTTGTGGGAATATTGGCAGAAACCGGGAAGGCAACCTTTAAGGCCATCCATACAGAAGGCACAAGAAACATGGTGGAGGCCTGCAAACAAAAGAATGTAAAGCGGTTTGTCCATATAAGCGCCCTTGGCACAAGAGAGAATGCAAGGAGTGAATATCACAAAACAAAATGGGAGGCAGAGGAGCTAATACGAAGCTCAGGGCTTGACTATACTATCTTCAGACCCTCAGTCCTCTTTGGTAAAGAGGATAAATTTGCAAATCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCAAAAACAAGATACAGGCTGTATCTGTAA
PROTEIN sequence
Length: 180
MILLTGATGFVGGNLLREMLKHGLQVRCISRNPSRAETIKKPGVELVQGDVTDKDSIVKAFADGKIDTAVHLVGILAETGKATFKAIHTEGTRNMVEACKQKNVKRFVHISALGTRENARSEYHKTKWEAEELIRSSGLDYTIFRPSVLFGKEDKFANXXXXXXXXXXXXAKTRYRLYL*