ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RBG_16_scaffold_22865_curated_5

Organism: Desulfobacca sp. RBG_16_58_9

partial RP 28 / 55 BSCG 27 / 51 ASCG 5 / 38
Location: comp(3302..4315)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 336.0
  • Bit_score: 456
  • Evalue 6.90e-126
  • rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJB1_DESAR similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 336.0
  • Bit_score: 456
  • Evalue 2.20e-125
  • rbh
Tax=RBG_16_Desulfobacca_58_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 338.0
  • Bit_score: 639
  • Evalue 3.30e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Desulfobacca_58_9_curated → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGATCCACAAAAACTGGACCGACTTAATTAAGCCCAAACGGCTGGAAGTGGATAGCGAAACCCACGACCGTTTCTATGGGAAATTCGTCTGCGAnnnnnnnnnnnnnnnnnTCGGCACCACCCTGGGGAACGCGCnnnnnnnnnnnnnnnnnnnATCCCTGAGGGGATCGGCCATCACTGCGGTCCGCATCAAGGATGTCTTTCACGAATTTTCGGCCATCCCCGGGGTCCTGGAGGATATCACCGAGATCCTCCTGAACTTGAAGCAGGTGCGCCTCAAGATGGCGGGCGAGGGGCTGAAGATCCTGCACCTGGAAGCTTCGGGGGCCGGGGAAGTCAAGGCGGGTGATATTCAAACGGACGGCCTGGTGGAAATTCTGAACCCCGACCACCACATCGCCACCCTGGCCGCGGACGGCCAGCTCGTCATGGAGATGACGGTAAGGACCGGCAAGGGTTTCGTCCCGGCGGAAGCCAACAAGGACGAAGACCAGCCCATCGGCTACATCCCCCTGGACGCCACCTTTTCCCCCATCCGCAAGGTGAACTACGTGGTGACCCAGGCCCGGGTGGGCCAGCGCACCGACTACGACAAGCTGACCCTGGAAGTCTGGACCGACGGCAGCCTCACCCCGGAAAACGCGGTGGGCTTTGCCGCCAAGATCCTCAAAGAGCACCTCAGCATGTTCATCAACTTCGAAGAGGAGCCTTCGGGGCTGGAGGAGAAGACGGCGGAAGAGGCCCCGGCCTTCAATGAGAACCTCTATCGCGGCGTCAATGAACTGGAGCTCTCGGTGCGGGCGGCCAACTGTCTGAGAAACGCCACCATCCGCTATATCGGGGAGTTGGTCCAGAAGACCGAACAGGAGATGCTCAAGACCAAAAACTTCGGCCGCAAGTCCCTGAACGAGATCAAAGAGATCCTGCAGGAGATGGGGCTGCATCTGGGAATGAAGCTGGAAAGTTTTGCACCCCCGGAAAACCTGCCGGAAAGGAAGGAAGAAGTAGCATGA
PROTEIN sequence
Length: 338
MIHKNWTDLIKPKRLEVDSETHDRFYGKFVCXXXXXXXGTTLGNAXXXXXXXSLRGSAITAVRIKDVFHEFSAIPGVLEDITEILLNLKQVRLKMAGEGLKILHLEASGAGEVKAGDIQTDGLVEILNPDHHIATLAADGQLVMEMTVRTGKGFVPAEANKDEDQPIGYIPLDATFSPIRKVNYVVTQARVGQRTDYDKLTLEVWTDGSLTPENAVGFAAKILKEHLSMFINFEEEPSGLEEKTAEEAPAFNENLYRGVNELELSVRAANCLRNATIRYIGELVQKTEQEMLKTKNFGRKSLNEIKEILQEMGLHLGMKLESFAPPENLPERKEEVA*