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RBG_16_scaffold_12131_curated_1

Organism: Desulfobacca sp. RBG_16_58_9

partial RP 28 / 55 BSCG 27 / 51 ASCG 5 / 38
Location: 3..560

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4528637 bin=GWC2_Nitrospirae_57_13 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 165.0
  • Bit_score: 109
  • Evalue 4.70e-21
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 168.0
  • Bit_score: 106
  • Evalue 1.30e-20
Tax=RBG_16_Desulfobacca_58_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 340
  • Evalue 1.30e-90

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Taxonomy

RBG_16_Desulfobacca_58_9_curated → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GGAGAACTCCCGGCGTTCGAAGAGCTGGTAATAAAATACCAGCGGGAGGTCTATGGCCTGGCGTGCCGCATTATTAGCGATTCAGAAGAGGCCAAGGATATGACCCAACAGGCCTTTTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGTTCCGCACCTGGCTGTTTCGGATAGCCATCAACCAATGCTACAACTACTTGAAGTCGCGCAAGAAGTTTGGGGATCCGGTGGATATGGACACCATGGTTCTCGTGGGCAATAATGAGTCGCCGGAATCAGACCTGGTTTCCCAGGACAACCGCCAGCGCCTTTACGCGGCCTTAGAAAAGCTGCCGGCCAAGCAGCGGGCGGTCATTACCCTGAAGGTGGAGCAAGGGTTGTCCTACCAGGAAATCAGCCAGGCCCTGGGAGGCACCGCAGGCGCCGCCCGGGTCAACTACTGCCAGGCGTTGAAGACCTTGAAGAAATATTTCCACAGCGAGGACGAACATGAGGTGGCAATGCGCCCTAATGCAGCGGTGGCTGCCAGAGTACCCCGACGGTGA
PROTEIN sequence
Length: 186
GELPAFEELVIKYQREVYGLACRIISDSEEAKDMTQQAFLXXXXXXXXXXXXXXFRTWLFRIAINQCYNYLKSRKKFGDPVDMDTMVLVGNNESPESDLVSQDNRQRLYAALEKLPAKQRAVITLKVEQGLSYQEISQALGGTAGAARVNYCQALKTLKKYFHSEDEHEVAMRPNAAVAARVPRR*