ggKbase home page

ACD35_140

Alias: ACD35p_88594.11238.9

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD35_140_1

Not on your lists

32..1990
DNA (1959bp) protein (653aa)
seg (db=Seg db_id=seg from=131 to=145)
seg (db=Seg db_id=seg from=380 to=392)
Uncharacterized protein {ECO:0000313|EMBL:EKD87611.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD35_140_2

Not on your lists

2011..3486
DNA (1476bp) protein (492aa)
OmpA family protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZDA1_9BACT (db=UNIREF evalue=2.0e-09 bit_score=68.6 identity=25.98 coverage=39.6341463414634)
von Willebrand factor, type A (db=KEGG evalue=3.0e-08 bit_score=63.9 identity=26.29 coverage=47.9674796747967)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
ACD35_140_3

Not on your lists

3470..5992
DNA (2523bp) protein (841aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=538 to=555)
transmembrane_regions (db=TMHMM db_id=tmhmm from=503 to=525)
Uncharacterized protein {ECO:0000313|EMBL:EKD87613.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD35_140_4

Not on your lists

6004..6654
DNA (651bp) protein (217aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=70)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=179)
ACD35_140_5
unknown

Not on your lists

6684..8357
DNA (1674bp) protein (558aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=456 to=478)
transmembrane_regions (db=TMHMM db_id=tmhmm from=421 to=443)
transmembrane_regions (db=TMHMM db_id=tmhmm from=491 to=513)
ACD35_140_6

Not on your lists

8380..9639
DNA (1260bp) protein (420aa)
coiled-coil (db=Coil db_id=coil from=45 to=66 evalue=NA)
seg (db=Seg db_id=seg from=134 to=146)
Uncharacterized protein {ECO:0000313|EMBL:EKD87609.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD35_140_7

Not on your lists

9716..10132
DNA (417bp) protein (139aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD87610.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD35_140_8

Not on your lists

11032..11274
DNA (243bp) protein (81aa)
carbohydrate kinase
Xylulokinase n=3 Tax=Sinorhizobium meliloti RepID=F6BQ95_RHIME (db=UNIREF evalue=2.0e-16 bit_score=88.6 identity=42.86 coverage=93.8271604938272)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=1 to=79 evalue=4.3e-19)
(db=HMMPfam db_id=PF00370 from=3 to=79 evalue=2.0e-14 interpro_id=IPR018484 interpro_description=Carbohydrate kinase, FGGY, N-terminal GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773))
Displaying 8 items

View Taxonomy