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RBG_13_OP3_44_8_RBG_13_scaffold_5847_6

Organism: Omnitrophica WOR_2 bacterium RBG_13_44_8b

partial RP 42 / 55 MC: 1 BSCG 40 / 51 ASCG 7 / 38 MC: 1
Location: comp(7251..7859)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHS1_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 24.5
  • Coverage: 196.0
  • Bit_score: 78
  • Evalue 7.40e-12
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 24.5
  • Coverage: 196.0
  • Bit_score: 78
  • Evalue 2.30e-12
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY12933.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 24.5
  • Coverage: 196.0
  • Bit_score: 78
  • Evalue 1.50e-11

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Taxonomy

Haliangium ochraceum → Haliangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAGTGACCTGGAGTTTGTCCAAAGGTGCGTCAAGGGAGAAAAGGCCGCCTGGGATGAATTCTTGAAGATTTATTCCCGGCTCATATACAGCTATATCAGAAATATACTGGAAGCAAAAGGCCATGCGCTGGCTGAAAATCAGGCTCAAGACGTATTTCAGGAACTCATCTATTCGCTAATTAAGGAGAATTTCAGGAAATTAGGGAGTTTTAAAGCTAAAAACGGATGCAGCCTTGCCAGCTGGTTAAGGCAGGTTACTGTCAACTTCGCAATAGATTATCTACGCAGGATTAAGGCCTGGGAAGTTTCCATTGATGAAGAGACGGATGACGGCATAAGCCTGAAAGATACCCTCGCCGATTCATCTTTGCCTGTTAGCGAAATAGTTAATCAGCATCAATTGCTGGAGTCCTTAAAAGAATGCATTAAGAAATTGGATACGGAAGATAAATATTTATTAAGATTATACTTAACTAAAAGATTAGAATTAGAGGATTTGAAGGAAATTTTACATATTTCGCGGCCGGCCGTGGATATGCGTAAGACCnnnnnnnnnnnnAGGTTAAAGGACTGTTTTAAAGACAAAGGATTGTTGTTAGATTTTTAA
PROTEIN sequence
Length: 203
MSDLEFVQRCVKGEKAAWDEFLKIYSRLIYSYIRNILEAKGHALAENQAQDVFQELIYSLIKENFRKLGSFKAKNGCSLASWLRQVTVNFAIDYLRRIKAWEVSIDEETDDGISLKDTLADSSLPVSEIVNQHQLLESLKECIKKLDTEDKYLLRLYLTKRLELEDLKEILHISRPAVDMRKTXXXXRLKDCFKDKGLLLDF*