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SCNpilot_expt_1000_bf_scaffold_6150_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6150_curated_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..304
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K4C8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE72290.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6150_curated_2
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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297..1025
DNA (729bp) protein (243aa)
Methyltransferase {ECO:0000313|EMBL:KGJ05478.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
Predicted O-methyltransferase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXK0_PHAMO
type 11 methyltransferase
SCNpilot_expt_1000_bf_scaffold_6150_curated_3
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1056..1937
DNA (882bp) protein (294aa)
Glycine--tRNA ligase alpha subunit n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HFK1_9PROT rbh
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] rbh
SCNpilot_expt_1000_bf_scaffold_6150_curated_4
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1937..4342
DNA (2406bp) protein (802aa)
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] rbh
Glycyl-tRNA synthetase, beta subunit n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IG07_BEII9 rbh
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_expt_1000_bf_scaffold_6150_curated_5
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5347..7113
DNA (1767bp) protein (589aa)
pyruvate phosphate dikinase; K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] rbh
pyruvate phosphate dikinase n=1 Tax=Sphingomonas melonis RepID=UPI00037B529D rbh
Pyruvate phosphate dikinase {ECO:0000313|EMBL:EEX54756.1}; TaxID=520452 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortus bv. 4 str. 292.;"
SCNpilot_expt_1000_bf_scaffold_6150_curated_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7402..8025
DNA (624bp) protein (208aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Cell wall hydrolyses involved in spore germination n=2 Tax=Alphaproteobacteria RepID=J3AJE3_9CAUL
cell wall hydrolase SleB
SCNpilot_expt_1000_bf_scaffold_6150_curated_7
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8044..8850)
DNA (807bp) protein (269aa)
nadC; nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] rbh
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZH24_AZOL4 rbh
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:KJR63936.1}; EC=2.4.2.19 {ECO:0000313|EMBL:KJR63936.1};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
SCNpilot_expt_1000_bf_scaffold_6150_curated_8
unknown

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9029..9439
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6150_curated_9
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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9439..10584
DNA (1146bp) protein (382aa)
Tax=RBG_16_Actinobacteria_68_21_curated
SCNpilot_expt_1000_bf_scaffold_6150_curated_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10485..10955)
DNA (471bp) protein (157aa)
quinolinate synthetase; K03517 quinolinate synthase [EC:2.5.1.72]
Quinolinate synthase A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJK7_NITHX
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_6150_curated_11
unknown

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11205..11324
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 11 items

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