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SCNpilot_expt_1000_bf_scaffold_17121_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 4813..5049

Top 3 Functional Annotations

Value Algorithm Source
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 79.0
  • Bit_score: 119
  • Evalue 4.70e-25
Peptide deformylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUU9_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 79.0
  • Bit_score: 119
  • Evalue 1.50e-24
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 79.0
  • Bit_score: 119
  • Evalue 2.10e-24

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Taxonomy

Pseudomonas sp. StFLB209 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
GTGCTGATCAATCCCGAAATCCAGGTCCTGGACCCCGCCCCCGAAGGCGGCTGGGAGGGCTGCCTGTCGGTTCCGGGCCTGCGCGGCTGGGTCGAGCGGCCCGCCCATATCCGCTATCGCGGGGTGGGCCTGGAAGGCGAGGTCATCGAGCGGGTGGCGCGGGGCTTTCATGCCCGGGTGGTGCAGCATGAATGCGACCATCTGGACGGGCGGCTTTACGTCTCGCGCATGACCGAC
PROTEIN sequence
Length: 79
VLINPEIQVLDPAPEGGWEGCLSVPGLRGWVERPAHIRYRGVGLEGEVIERVARGFHARVVQHECDHLDGRLYVSRMTD