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SCNpilot_expt_1000_bf_scaffold_8237_curated_9

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(6014..7213)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Caulobacter crescentus OR37 RepID=R0EBT0_CAUCE similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 392.0
  • Bit_score: 363
  • Evalue 3.90e-97
  • rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:ENZ82938.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 392.0
  • Bit_score: 363
  • Evalue 5.50e-97
RND efflux system membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 393.0
  • Bit_score: 351
  • Evalue 2.80e-94
  • rbh

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Taxonomy

Caulobacter vibrioides → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCCTGACAAGAATCCCGATGCCGGACCGCATGACCGCAGCGGCCCCAGCCTGTTGGATCACAAGACCCCGCCCAGCCTGAAGCGCTGGGGCGTCATCGCCGCCGCCGTGGCGCTGGCGGTGGCGGTAGTCGGCCTGAGTGTGCGCTTCCTGGACAGCCGCAGCACCCGGGCCTGGACCGAGGAACAGGCGGTGCAGACCGTGCAGGTCATCAAGCTGGATGCGCCCAAGGCGGGCGGCGAGTTGAACCTGCCGGGTGAGGTCCAGGCTTTCACCACCGCCCAGATTCACGCCCAGGTCAGCGGCTATGTGAAGAAGTGGCATGTCGATATCGGCACGCCGGTGAAACAGGGCCAGCTTCTGGCCGAACTGGATACGCCGGAGCTGGACGGCCAGGTGCAGCAGGGCCGCGCCAATGTCGCCAACGCCCTGGCGGCGCAGCGCCTGTCGGCCCAGACGGCGCAGCGCTGGGACACGCTGTTCCAGCAGGGCGCGGTGGCGCGGCAGGACAAGGATGTGCGCGACGCCGACCTGGAGGCGCGCAACGCCGCGCTGGCCGCCGCCCGCGCCGGTCTCTACAGCCTGACGGCGCAGGAAGGCTTCAAGCGCCTGGTGGCGCCGTTCGACGGCATCGTCACCACCCGCGCGGTGGATGTGGGCGCGCTGGTCACCACCGGCAACAGCGCCACGCCGCTTTTCACCGTGGCGGACCAGAGCCGCCTGCGGGTCTATGTCCGCGTGCCGCAGAACTATGCCGCCTATGTCCAGCCGGGCATGGAGGTCAGCTTCACCGTGCCCCAGCATCCCGGCCGCGAATTCAAGGCCAGGCTGGTCGCCAGCGCGGGCGCCGTGGCCAGCGCCACCGGCACCATGCTGGTGCAGTTCGCGCTGGACAATGCCGACGGCGCGCTGCAGCCGGGCGGCTATGCCACGGTGAAATTCCCCGTGCCCGCCGGGGCGCACGGCCTGCGCATTCCCGCCACGGCGCTGATGTTCCGCGCCCAGGGGATGCAGGTCGCCACGGTGGACGCCACCAACCATGTGCGGCTCAAGACCATCACCATCCAGCGCGACCTGGGCGCGGCGGTGGACGCGGTGGGGGTGTCGGCCAGCGACCGCATCGTGGACAATCCGCCGGATTCCCTCCAGGAGGGCGATCCGGTCCAGGTCGCCACCCGGACCACGGCGCCCGCCAAGTAA
PROTEIN sequence
Length: 400
MPDKNPDAGPHDRSGPSLLDHKTPPSLKRWGVIAAAVALAVAVVGLSVRFLDSRSTRAWTEEQAVQTVQVIKLDAPKAGGELNLPGEVQAFTTAQIHAQVSGYVKKWHVDIGTPVKQGQLLAELDTPELDGQVQQGRANVANALAAQRLSAQTAQRWDTLFQQGAVARQDKDVRDADLEARNAALAAARAGLYSLTAQEGFKRLVAPFDGIVTTRAVDVGALVTTGNSATPLFTVADQSRLRVYVRVPQNYAAYVQPGMEVSFTVPQHPGREFKARLVASAGAVASATGTMLVQFALDNADGALQPGGYATVKFPVPAGAHGLRIPATALMFRAQGMQVATVDATNHVRLKTITIQRDLGAAVDAVGVSASDRIVDNPPDSLQEGDPVQVATRTTAPAK*