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SCNpilot_expt_1000_bf_scaffold_3154_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 5947..6780

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein {ECO:0000313|EMBL:BAQ73927.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 255.0
  • Bit_score: 183
  • Evalue 5.40e-43
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 264.0
  • Bit_score: 178
  • Evalue 3.00e-42
Putative membrane protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEG9_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 264.0
  • Bit_score: 178
  • Evalue 9.50e-42

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Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGGCGGCGCACCATTGGCGCGGCCGCCGCTTCTGCTACAAAAGCGCGGGGCGGAACACCGATTTGCTGATCCTCAAACTGACCATCGTGCCACTGGCGCTGCTGCTGCTGGGCATTGCCGACCGGCTGTACGGCCCCCGCGTGGCCGGATGGCTGGCGGGCTTTCCCGTGGTGGCCGGGCCGTTGCTGCTGTTCATCACCCTGGACCTTGGTCCGGTCTTCGGCAGCGCCGCCGCGCTGGGCGCCTATTTCGGGCTGGTGCCCTGGCTGGCCTTCACCCTGAGCTATGCCGCCTGTGCGCAACGCCTGGCATGGCCCTGGTGCATCGCCATCGCGTTCACCGCCTGGACGGTGGCGGCCGTCGCCTGCGTGCTGCTGCAGGACGGCCCCACATGGCTGATCGCCCTGCCCGCCCTGCTGATGGCCGCCGCCATCCTTTTGTATCCGCGCGGCACGGCCTCGGGCGAGAAGCGCGAGCATGGCAAATGGGGCCTGGCTGTCCGCATGGTGGCGGGTGCGACCCTGACGGGGGCGATCACCCGCTTCGCCGCGACCCTGGGCACCCACTGGTCAGGCATGTTCACCACCTTCCCGGTGATGGGCTCGATCATCTGCATTTCCAGCCATATCCAGCATGGCCGCCAGGCGGTGCGGGACATGGTGGGGGGCATGACCCTGGGACTGACATCGGTGACCTGCTTCTGCTTTGTGGTCTATGGACTGCTGCCCGCCGCCAGCACCTGGACCGCCTTCGGCCTGGCCTTGGCGGCCAGCTTCCTGGCCATGGCCCTGACCGGACTTCTGTTCCGGGCCCGCGACAGCAAGGCCGCCTGA
PROTEIN sequence
Length: 278
MAAHHWRGRRFCYKSAGRNTDLLILKLTIVPLALLLLGIADRLYGPRVAGWLAGFPVVAGPLLLFITLDLGPVFGSAAALGAYFGLVPWLAFTLSYAACAQRLAWPWCIAIAFTAWTVAAVACVLLQDGPTWLIALPALLMAAAILLYPRGTASGEKREHGKWGLAVRMVAGATLTGAITRFAATLGTHWSGMFTTFPVMGSIICISSHIQHGRQAVRDMVGGMTLGLTSVTCFCFVVYGLLPAASTWTAFGLALAASFLAMALTGLLFRARDSKAA*