ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3154_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3154_curated_1
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..985)
DNA (984bp) protein (328aa)
Putative phosphonate C-P lyase system protein PhnK n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RT12_9PROT
Putative phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:EFH09554.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EFH09554.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_3154_curated_2
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(987..1823)
DNA (837bp) protein (279aa)
ABC transporter permease n=1 Tax=Roseomonas sp. B5 RepID=UPI00035CE788 rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EFH10787.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
appC; ABC transporter permease rbh
SCNpilot_expt_1000_bf_scaffold_3154_curated_3
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1820..2797)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030712D0 rbh
DppB protein {ECO:0000313|EMBL:BAQ44938.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
appB; oligopeptide ABC transporter rbh
SCNpilot_expt_1000_bf_scaffold_3154_curated_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2808..4391)
DNA (1584bp) protein (528aa)
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJR61505.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
peptide/nickel transport system substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
Peptide/nickel transport system substrate-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2H1_AZOS1 rbh
SCNpilot_expt_1000_bf_scaffold_3154_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4394..5878)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z171_9RHIZ rbh
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
MlrC domain-containing protein
SCNpilot_expt_1000_bf_scaffold_3154_curated_6
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5947..6780
DNA (834bp) protein (278aa)
Putative membrane protein {ECO:0000313|EMBL:BAQ73927.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
Putative membrane protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEG9_PSEF5
SCNpilot_expt_1000_bf_scaffold_3154_curated_7
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6810..7232
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CLB6_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EMP54009.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter santoriniensis NKSG1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3154_curated_8
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7369..8379)
DNA (1011bp) protein (337aa)
Glutamate-1-semialdehyde aminotransferase {ECO:0000313|EMBL:KFL26342.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000376FE32 rbh
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
Displaying 8 items

View Taxonomy