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SCNpilot_expt_1000_bf_scaffold_5918_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(562..1419)

Top 3 Functional Annotations

Value Algorithm Source
Squalene synthase HpnD (Fragment) n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUF4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 274.0
  • Bit_score: 304
  • Evalue 9.00e-80
  • rbh
Squalene synthase HpnD {ECO:0000313|EMBL:EHM03398.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 274.0
  • Bit_score: 304
  • Evalue 1.30e-79
squalene synthase HpnD similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 274.0
  • Bit_score: 289
  • Evalue 1.60e-75

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Taxonomy

Acetobacteraceae bacterium AT-5844 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGACCAACGCGGAAAATCTGGGCGGCCCCGCCGCTCTGGCCGTCAAGAAGAAGGCCAGCGGCAGCTCCTTCTACCTCGCCATGCGGCTGATGCCGGTGGAGGAACGCGACGCGATGTTCGCCATCTATGCCTTCTGCCGCAAGGTGGACGACATCGCCGATGACGGCGTGGGCACGCGCGCGGAGCGGCATGAAAAACTGGAACAGTGGCGCGCCGACCTGCGCGGGCTCTATGCGGGCGAAATGCCCGCCCAGGTCCGCTTCCTGGCGCCCGCGGTGAAGACCTATGGCCTGCGGCTGGACGATTTCCTGGCGGTGCTGGACGGNNNNNNCATGGATGTGGCCGAGGACATCGTCGCGCCTGGCCTGGCGACGCTGGACCTGTATTGCGACCGGGTCGCCAGCGCGGTGGGGCGGCTGTCCATCAAGGTGTTCGGCATGGAGGAAGGGCCGGGCTTCGACCTGGCGCATCATCTGGGCCGGGCGCTGCAACTCACCAATATCCTGCGCGATATCGACGAGGACGCCGCCATCGGCCGTCTCTATCTGCCGCGCGAATATCTGATGGAAATGGATTGCTGCCGCCAGATGGATCCCAAGGCCATCATCAATCAACCCGCGATCGACGACGTCTGCCGCAAGGTGGCGGCGTTGGCCCATGGCCATTATGAGCAGGCGGGTCGCATCTTCGCCACCCGGCCCAAGGGACGGATCAAGACGCCGCGCCTGATGGGTGCGGTCTATTCCGAAATCCTGCGCCTCAGCGAGGCCCAGGGCTTCGCCCCGCCGCGTCACCGGGTGTCGATCCCGCGCGGCAAGCTGCTGTCGCTGGTGCTGCGCCAGGGACTCCTGTCATGA
PROTEIN sequence
Length: 286
MTNAENLGGPAALAVKKKASGSSFYLAMRLMPVEERDAMFAIYAFCRKVDDIADDGVGTRAERHEKLEQWRADLRGLYAGEMPAQVRFLAPAVKTYGLRLDDFLAVLDXXXMDVAEDIVAPGLATLDLYCDRVASAVGRLSIKVFGMEEGPGFDLAHHLGRALQLTNILRDIDEDAAIGRLYLPREYLMEMDCCRQMDPKAIINQPAIDDVCRKVAALAHGHYEQAGRIFATRPKGRIKTPRLMGAVYSEILRLSEAQGFAPPRHRVSIPRGKLLSLVLRQGLLS*