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SCNpilot_expt_1000_bf_scaffold_3482_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 587..1756

Top 3 Functional Annotations

Value Algorithm Source
ldc; lysine (EC:4.1.1.17 4.1.1.18); K01581 ornithine decarboxylase [EC:4.1.1.17] similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 373.0
  • Bit_score: 338
  • Evalue 3.10e-90
  • rbh
Lysine n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMU5_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 373.0
  • Bit_score: 338
  • Evalue 1.00e-89
  • rbh
Lysine {ECO:0000313|EMBL:ACI98761.1}; EC=4.1.1.17 {ECO:0000313|EMBL:ACI98761.1};; EC=4.1.1.18 {ECO:0000313|EMBL:ACI98761.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 373.0
  • Bit_score: 338
  • Evalue 1.40e-89

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Taxonomy

Rhodospirillum centenum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAACGCGCCCACGACCCTCGACGCCCTGCCCCGCTTCGCCTCGCCCCTCAAGGCGATCGAAAGCCTCAAGCCGTCCGAGCCGCTGTATCTGGTGCATCCGGAAAAATTCGCCGCCGCCGCCGAGACGTTCCTCAAGGGCTTTCCCGGCGACGTGCTCTATGCGGTGAAATCCAATCCGCATCCCATCGCCATCACCCATCTGTGGAACGCCGGTATCCGCCATTTCGACACCGCCAGCCTGGGCGAGATCGAAGCGGTGAAGTCGCTGTTCCCCGCCGCCGTCTGCCATTTCATGGCGCCGGTGCGGTTGGCGGGCCAGGCCAAGGCCGCTTTTGAACGGCATGGCGTCACCGACTTTGTGGTCGACAGCGAATCCGAACTGACCAAGCTGCTGGCGGAAACCGGCAACCCGAAAAAGTTGCGCGTCTTCGTGCGGCTGGTGGCCCAGCTGGGCGGCGCGCTGCTGGAAATGTCCAGCAAGTATGGCTGCCGCCCCGAGGAAGGCGCGCGCCTGCTGCGGAAGATCGCCGCCAGCGGCGCCCAGCCCTGCCTGACCTTCCATGTCGGCAGCCAATGCCTGTCGCCCTTCACCTATGCCCAGGCGATCGAAATCGCCCAGCAGACCATCCGGCTGGCGGGCGTCAAGATCGCCGCGCTGGACATCGGCGGCGGCTTTCCGGCCGCCTATGCGGGACAGGAACCGCCGCCCTATCACTGGTTCTTCGACATGATCGCCACCGCGCTGGACAATCTGGCCATGCCGGATCTGAACGTGATGTGCGAGCCGGGCCGCGCCCTGTGCGCGCCGGGCATCTCGCTGGTGACCCAGGTGGTGATGCGCCGCGACGACCGGCTGTACATGAATGACGGCATCTATGGCAGTTTCGACGAGCAGCGTTTCGCCAGCTTCGACGAGAACTATCCGCCCACCGGCATCACGCTGGACGCCAAGGGCAAGGCGAAAACGCTGACCGGCGAGTTGCGCCCTTTCCGCTTTTACGGCCCCACCTGCGACAGCGCCGATGTGCTGCCCCGCCCGGTGATGCTGCCCGACGCCGTCGCGGCGGGCGATTACGTGCTGTTCGGGACGATGGGCGCCTATACCGTCTCCTCGCGCTCGCCCTTCAACGGGTATTACCCCGACGCCTGGGCGGTTATCGTTTCGTGA
PROTEIN sequence
Length: 390
MNAPTTLDALPRFASPLKAIESLKPSEPLYLVHPEKFAAAAETFLKGFPGDVLYAVKSNPHPIAITHLWNAGIRHFDTASLGEIEAVKSLFPAAVCHFMAPVRLAGQAKAAFERHGVTDFVVDSESELTKLLAETGNPKKLRVFVRLVAQLGGALLEMSSKYGCRPEEGARLLRKIAASGAQPCLTFHVGSQCLSPFTYAQAIEIAQQTIRLAGVKIAALDIGGGFPAAYAGQEPPPYHWFFDMIATALDNLAMPDLNVMCEPGRALCAPGISLVTQVVMRRDDRLYMNDGIYGSFDEQRFASFDENYPPTGITLDAKGKAKTLTGELRPFRFYGPTCDSADVLPRPVMLPDAVAAGDYVLFGTMGAYTVSSRSPFNGYYPDAWAVIVS*