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This organism can only be binned in the context of its binning project PLM4_90cm_b1_sep2016. Please contact the project owner (lavik17@gmail.com) to become a member and gain access.

SCNpilot_expt_1000_bf_scaffold_10838_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 3148..3633

Top 3 Functional Annotations

Value Algorithm Source
cupin n=1 Tax=Sphingomonas elodea RepID=UPI0002630463 similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 166.0
  • Bit_score: 97
  • Evalue 1.60e-17
Uncharacterized protein {ECO:0000313|EMBL:AHE56385.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 157.0
  • Bit_score: 89
  • Evalue 4.70e-15
cupin similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 171.0
  • Bit_score: 80
  • Evalue 4.90e-13

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGCGCCTTCTGCTTGCCGCCGCTCTGTATGCCGTCACCGGCGCCGCCCTCGCCCTGCCCGCCGCCGCGCAGACGGCCGCTGCCCCGGCCACGGCCAAGCTCTATGCCGCGCCGCAGGAATATGACGCCGCCGTGGCCGCCGGGCGCGCCGCCGCCACCATGACGCCGCAGATGCTGGTCGCCAACGGCCCTTACCGCGCCCAGGTGGAACATCGTGACAAGCCCACTCCCGCCTCGCTGCACGAAGCCACCGACGAATTCATCAGCGTCACCGGCGGCAGCGGCACCATCGTCATCGGCGGCACGCTGAAGGACCAGACCCGGCGCAATCCCACCAACCTGTCGGGCAGCGGCATCGAGGGCGGGACGCCCTATACCGTCGCCAAGGGCAGTTATTTCCTGATTCCCGCCGGCACGCCGCATTACTTCGCCAGCATGGGCCCGGAGGGGCTGACCATCGTCGCCCTGCACGTGCCCAAGCAATAA
PROTEIN sequence
Length: 162
MRLLLAAALYAVTGAALALPAAAQTAAAPATAKLYAAPQEYDAAVAAGRAAATMTPQMLVANGPYRAQVEHRDKPTPASLHEATDEFISVTGGSGTIVIGGTLKDQTRRNPTNLSGSGIEGGTPYTVAKGSYFLIPAGTPHYFASMGPEGLTIVALHVPKQ*