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SCNpilot_expt_1000_bf_scaffold_3521_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2357..5122)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 938.0
  • Bit_score: 785
  • Evalue 1.00e-223
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000369939D similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 933.0
  • Bit_score: 778
  • Evalue 6.90e-222
  • rbh
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 945.0
  • Bit_score: 771
  • Evalue 2.60e-220
  • rbh

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2766
ATGACCAAACGTATGCTGATCGATGCCAACCACCCGGAAGAGACCCGCGTGGTCGTTCTGGACGGCTCCAGGGTCGAGGAATTTGATTTCGAGGCCGCCTCCAAGCGGCCGCTCAAGGGCAACATCTATCTGGCCAAGGTGACGCGCGTCGAGCCGTCGCTGCAGGCCGCCTTTGTCGAATATGGCGGCAACCGCCAGGGCTTCCTGGCTTTCGCCGAAATCCATCCCGACTATTACCAGATCCCGGTCGCCGACCGTCAGGCCCTGCTGGCCGAGCAGGAGGCCGAGGCCCGCCGCCGCCAGGAGGACGATATCGAGTCCTTCGAGATCACCGGCGCCAAGACCGAGGACGCCGACGCCGAGGAGGAGGACGCCGAGGACGAAGCCGATACCGGCGAGGACAGCGCCGAGATGGCGCCCCTGGTGCCGCTGGAAGCCGCCCCCGAGAAGGACGAGGAGGAGGACGCCTCCTCCGCCGCCGAAGGCCCCACGGCCGATGACCCCGCCACCGAAGACGATGACGACCATGCCGATGTCTTCGTCAATCATGGCGGCGCCCCCATCGAAATCGAGGCCGACCACGATCATGACGAGGACGATGCCGTCCCGTCCAAGTCCGAAGCCGCCGCCGCGGCGCTGGCCGACTATGACGGAGACGCCGATGTCGCCGCCGCCGAGGCCGCCCAGGAGAATGAAGGCGAGATCGAGCCGGTCGAGGCCCAGACCGCCGCGACCGACACCGAGGTGATCGAGGGCGACGCCCTGCCCGCCCCGGCCGAGGACGAGGCCGAAGGCGAAGCGGGCGCGGAGGGCGGCGACGCCCAGCCGCTCCAGGCGCAGCGCCCCTCGCAGCGCTGGGTCCGCAAGAAGCACTACAAGATCCAGGAAGTCATCAAGCGCCGCCAGATCATCCTGGTGCAGGTGGTCAAGGAAGAACGCGGCAACAAGGGCGCGGCCCTCACCACCTATCTGTCGCTGGCCGGGCGCTATTGCGTGCTGATGCCCAACACCCCGCGCGGCGGCGGCATCTCCCGCAAGATCACCAACGCCGCCGACCGCAAGCGCCTGAAAAGCGCCGCCCAGGGGCTGGAGCTGCCCGAGGGCATGGGCCTGATCATCCGCACCGCGGGCGAGAACCGCACCAAGCTGGAGATCCGCCGCGACTATGACTATCTGCTGCGGCTGTGGGACACGATCCGCGAAAAGACGCTGTCCTCCAACGCGCCCGCCTGCGTCTATGAGGAAGGCGACCTGATCAAGCGCGTGATCCGCGACCTGTTCACCAAGGATGTGCAGGACATCGTGGTGGAAGGCGAACAGGGCTACCGCAACGCCAAGGACTTCATGCGGATGCTGATGCCCAGCCATGCCAAGCATGTGCATCACTACAAGGACACGGTGCCGCTGTTCCAGCGTATGCACATCGAAAGCCAGCTGGATTCGATGTTCTCGCCCACCGTCACCCTCAAGTCGGGCGGCTATATCGTCATCAACCAGACCGAGGCGCTGGTTTCCATCGACGTGAACTCCGGCCGCGCCACCCGCGAACATTCGATCGAGGAAACCGCGCGCAAGACCAACCTGGAGGCCGCCAGCGAGATCGGCCGCCAGCTGCGCCTGCGCGACCTGGCCGGCCTGATCGTGATCGACTTCATCGACATGGAGGAAGGCCGCAACGACCGCGAGGTCGAAAAACGCCTGCGCGACGCGGTGAAGAACGACCGCGCCCGCGTCCAGATCGGCAAGATTTCGCAGTTCGGCCTGCTGGAAATGTCGCGCCAGCGCCTGCGCGCGGGCGTGGTCGCCGGTTCCACCGTCACCTGCCCGCACTGTCAGGGCACCGGCCTGCTGCGCTCCATCGAATCCTCGGCCCTGCGCGTCCTGCGCGGGCTGGAAGAGGAAGGCGAGAAGAACCGCGCCGCCGCCGTGACCGTCAAGATCGACAATGAGGTGGCGCTCTACATCCTCAACCAGAAGCGCCACGAACTGGCGCGCATCGAGGCCGAGCACGGCCTGGAGATCACCTTCGATCCCAAACCCGGCATGGCGGGCGGCGCCTTCGAGATCGAGCGCACCAAGACCCGCGATCCGGGCGACCGGCCGCGCAGCAACGCCGCCGTCAGCATCGAGGCGGGCTTCGTGCCCTCCGACGAGCCGGAACCGGACTATGTCGAAGAGAGCGAGGAAGAAGACGAGCTCGTCGAAACGGACGAACCCGCCGACTCCGAGGAAGACGAGGACCGCGGCGCCGGTGACCGCGCCCCTGGCGAACGAGAAAGCCGCGAGCGGGGCGAGAATGGCCGCAAGCGCCGCCGCCGTGGCGGCCGTGGACGCACCCGTGACCGCGGCGAACGCGACGGCCAGCCGCAACCGGCCACAGCGGAATCCCCCGCCGCCGAAGGCGAGACGCCGGACGGCGACGACCTGCCGGAAAGCGCCGCCAATGGCGAAGCCTCCACCGGTGAGAATGGCGAGGCCCGCCGCAAGCGCCGCCGCCGCCGGGGCCGCCGCGGCGGCCGCGACCGCAATGACCGCGCCCCCGGCGAGGCGCCCGGCGAGACGGACAAGCAGGCCCCGTCCTATGCCGCCGACGACCGTTTCGGCATTCCCGACGAGATCGACACCACGCCCAGCAGCGCGCCCTCGGCGCCGGGTGCGTCCTCCGCCCCGGTCTGGTCGCTGAAGGACGATGAAGTGGACACCACGCCCAAGGATGAGACCAAGCCCAAGAAGGGGTGGTGGCAGAAGGCCTTTGGCGGGGAGTAG
PROTEIN sequence
Length: 922
MTKRMLIDANHPEETRVVVLDGSRVEEFDFEAASKRPLKGNIYLAKVTRVEPSLQAAFVEYGGNRQGFLAFAEIHPDYYQIPVADRQALLAEQEAEARRRQEDDIESFEITGAKTEDADAEEEDAEDEADTGEDSAEMAPLVPLEAAPEKDEEEDASSAAEGPTADDPATEDDDDHADVFVNHGGAPIEIEADHDHDEDDAVPSKSEAAAAALADYDGDADVAAAEAAQENEGEIEPVEAQTAATDTEVIEGDALPAPAEDEAEGEAGAEGGDAQPLQAQRPSQRWVRKKHYKIQEVIKRRQIILVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTPRGGGISRKITNAADRKRLKSAAQGLELPEGMGLIIRTAGENRTKLEIRRDYDYLLRLWDTIREKTLSSNAPACVYEEGDLIKRVIRDLFTKDVQDIVVEGEQGYRNAKDFMRMLMPSHAKHVHHYKDTVPLFQRMHIESQLDSMFSPTVTLKSGGYIVINQTEALVSIDVNSGRATREHSIEETARKTNLEAASEIGRQLRLRDLAGLIVIDFIDMEEGRNDREVEKRLRDAVKNDRARVQIGKISQFGLLEMSRQRLRAGVVAGSTVTCPHCQGTGLLRSIESSALRVLRGLEEEGEKNRAAAVTVKIDNEVALYILNQKRHELARIEAEHGLEITFDPKPGMAGGAFEIERTKTRDPGDRPRSNAAVSIEAGFVPSDEPEPDYVEESEEEDELVETDEPADSEEDEDRGAGDRAPGERESRERGENGRKRRRRGGRGRTRDRGERDGQPQPATAESPAAEGETPDGDDLPESAANGEASTGENGEARRKRRRRRGRRGGRDRNDRAPGEAPGETDKQAPSYAADDRFGIPDEIDTTPSSAPSAPGASSAPVWSLKDDEVDTTPKDETKPKKGWWQKAFGGE*