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SCNpilot_expt_1000_bf_scaffold_9867_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(4972..6066)

Top 3 Functional Annotations

Value Algorithm Source
capD; polysaccharide biosynthesis protein CapD; K13013 O-antigen biosynthesis protein WbqV similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 300.0
  • Bit_score: 222
  • Evalue 1.80e-55
Polysaccharide biosynthesis protein CapD, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMY1_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 300.0
  • Bit_score: 222
  • Evalue 5.70e-55
Polysaccharide biosynthesis protein CapD, putative {ECO:0000313|EMBL:ACI98878.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 300.0
  • Bit_score: 222
  • Evalue 8.10e-55

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Taxonomy

Rhodospirillum centenum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1095
TGGATCACCAATCTCAGCTTCCTAGTGGCGCCGCGCTTCTTCGTCCGTGCGCTCAGCGAATCCCGCCTCTCCAAATTCGGCAAGTCCAAGCCGCAGCCCCTGCTGCCGGCGCTGATCATCGGCGACCTGGACCGCATGGAAGCCTTCATCCGCGAATCGGGCCGCAGCACCAAGCCGCGCTATCATGTGGTGGGCGTGCTGAGCGACGACAACAATCTGCGCGGCAGTGTGCTGCATGGCGTAGAGGTTATGGGCAGCATCAAGAAGATGCCACAAATCCTAGCGGTCCTGAATCGCCGCGGCATCCGGCCCCACACCCTGATCGTGGCGCGAGACAACGCCTCCCCAACCGAACTGAAACAGGTGCTGGAAATCACCGGCGCCCATGACCTCAAGGTTGGCCGCCTGCCTTCGCACGGCGCCTTCGAGGACAATACCAAGGTGCGCTCGATTGAACTGGCCGACCTGCTTGGCCGTCCCGAGATCGTAGTCGAAAAGACCGCGGTGTCGCAGATGATCCACGGCAAGGTGGTGATGGTCACCGGAGGCGGTGGCAGCATCGGCAGCGAATTGTCGCGCCAGATCGCCCGACTGGAGCCCAGCAAGCTGATCGTGGCAGATTTCGGCGAATTCAATCTCTATTCCATCGACAAGGAACTGGAAGAGGCTTTCCCAAATGTGCCGCGCCAGACCGCGCTACTGGACGTGCGCGACGGCGAGCTGGTGTCGCAGTGGATCGAAAAGACCTGCCCGGACATCGTATTCCATGCCGCCGCGCTCAAGCATGTTCCGCTGCTGGAAGATCACCCAATCGAGGGCGTAAAGACNNNNNNNNNNNNNNNNNCAATGTCGCGGAAGCCTGCCGCCGCCATGGCGTGTCGGCTATGGTCACCATCTCCACCGACAAGGCGGTCAATCCTTCCAATATCATGGGCGCGACCAAGCGCCTGGCGGAAGCCTATTGCCAGGGCCTGGACCAGGCCGATCCCAATGGCGGTACCCGCTTTGTCGCCGTGCGCTTCGGCAATGTCCTGGGCTCAGCCGGCTCGGTCGTGCCGCTGTTCCAGCGCCAGATCGAGGCGGGCGGTCCTGTGA
PROTEIN sequence
Length: 365
WITNLSFLVAPRFFVRALSESRLSKFGKSKPQPLLPALIIGDLDRMEAFIRESGRSTKPRYHVVGVLSDDNNLRGSVLHGVEVMGSIKKMPQILAVLNRRGIRPHTLIVARDNASPTELKQVLEITGAHDLKVGRLPSHGAFEDNTKVRSIELADLLGRPEIVVEKTAVSQMIHGKVVMVTGGGGSIGSELSRQIARLEPSKLIVADFGEFNLYSIDKELEEAFPNVPRQTALLDVRDGELVSQWIEKTCPDIVFHAAALKHVPLLEDHPIEGVKXXXXXXXMSRKPAAAMACRLWSPSPPTRRSILPISWARPSAWRKPIARAWTRPIPMAVPALSPCASAMSWAQPARSCRCSSARSRRAVL*