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SCNpilot_expt_1000_bf_scaffold_4880_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(14818..15006)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S2J2_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 62.0
  • Bit_score: 101
  • Evalue 4.30e-19
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=579483 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella sp. S4079.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 62.0
  • Bit_score: 101
  • Evalue 6.10e-19
rho; transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 62.0
  • Bit_score: 99
  • Evalue 4.00e-19

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Taxonomy

Loktanella sp. S4079 → Loktanella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
GCCATCGACATCATGCGCTCGGGCACCCGCAAGGACGAGCTGCTGGTCGAGAAGGGACGGCTGGCCAAGACCTATGTCCTGCGCCGTATCCTGTCGCCGATGGGCACGGTGGACGCCATCGAGTTCCTGCTCGACAAGCTGAAATCCGCGAAAAACAACGCCGACTTCTTTGAATCGATGAATACCTGA
PROTEIN sequence
Length: 63
AIDIMRSGTRKDELLVEKGRLAKTYVLRRILSPMGTVDAIEFLLDKLKSAKNNADFFESMNT*