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SCNpilot_expt_1000_bf_scaffold_6778_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1581..1919)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00038160CA similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 106.0
  • Bit_score: 108
  • Evalue 4.90e-21
excisionase similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 111.0
  • Bit_score: 86
  • Evalue 6.20e-15
Excisionase {ECO:0000313|EMBL:CAX25985.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 111.0
  • Bit_score: 86
  • Evalue 2.80e-14

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGAGTATAGCTCCGGATCTCGATGCCCCGTTGCGTCTCGGCCAAGCGGCCAAGCTGGCTTTTCCCGATGGTGCCTTGACGGAGAGCGGACTGCAAACCGAATTCCGCAAGGGCAACCTTGAATGCGAGCGGATTGCAGGAAAGCTCTTCACCACACTGAACAACATCAAGCGGATGAGGGAACGATGCCGCGAAAGTCAAAGGGCGCGCGGCTCTACCTGCGCAAGCGAAGGGGAAGACCGTCCGTTTGGGTCATTCTCGACGGAACAGTTGAAATCTGCACAGGTTGCGGCGAGCCTGATCGCGACGCGGCTGAAATCCAGCTCCAAAAGTACCTAG
PROTEIN sequence
Length: 113
MSIAPDLDAPLRLGQAAKLAFPDGALTESGLQTEFRKGNLECERIAGKLFTTLNNIKRMRERCRESQRARGSTCASEGEDRPFGSFSTEQLKSAQVAASLIATRLKSSSKST*