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SCNpilot_expt_1000_bf_scaffold_9459_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3333..4109)

Top 3 Functional Annotations

Value Algorithm Source
Ectoine utilization protein EutA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C766_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 257.0
  • Bit_score: 444
  • Evalue 8.60e-122
  • rbh
Ectoine utilization protein EutA {ECO:0000313|EMBL:EYR78341.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 257.0
  • Bit_score: 444
  • Evalue 1.20e-121
arylmalonate decarboxylase; K01799 maleate isomerase [EC:5.2.1.1] similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 257.0
  • Bit_score: 410
  • Evalue 4.30e-112
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGCAGACGCTCGAACTATCCCTTGCTTCCCGCGCGCCGAGGCTCGACGACCGCCCGCTGGAAAAGCGCGTCGGCCTGATCATCCTGGCGACAGACCATACGACGGAGGTGGATTTCCAGCGCATGGTCGCAAGCGACCGGATCGGCGTCTACGCCACGCGCATTCCCTATGCCAACCCGGTGACGCCGGAGAACCTGCGCGCCATGCAGCCCTCGCTGACGGCCGGCGCCGCGCTCATCCTGCCGGACGAGCCGCTCGACGTCGTCATGTATTCCTGCACCTCCGCCTCGGTGGTGATCGGTGACGATGCGGTGGAGGCGGCCGTCAAGGCCGCCAAGCCGGAGGCTGCCGTCGTGACGCCGACCGCCGCCGCCGTCCGCGGCCTCAAGGCCTTCGGCGCGAGGCGCATCTCGGTGCTGACGCCCTATACGCTCGAAACCAGCCGGCCGATGGCGGATTATTTCCTGACTCTCGGCTTCGACATCGCCCGCTTCACCTGCCTCGGCCTTTCCGACGACCGGGAGATGGCGCGCATTTCCCCCGACGAGATCGTCGCTTTCGCCCGGGAAGCGACGGCTCCCGATTGCGACGCGCTCTTCATCTCCTGCACGGCCGTTCGCGCGGCGGGCGTGGCGGCAGAGATCGAGGCCGCCATCGGCAAGCCGGTCATCACCAGCAACCTCGCTACCGCCTGGGCGTGCCTGCGGCTTTGCGGCGATGCGGCGCCACGGCCGGAACTCGGCCGGTTGATGACGCGCGCCTATCCGGGCAGATAG
PROTEIN sequence
Length: 259
MQTLELSLASRAPRLDDRPLEKRVGLIILATDHTTEVDFQRMVASDRIGVYATRIPYANPVTPENLRAMQPSLTAGAALILPDEPLDVVMYSCTSASVVIGDDAVEAAVKAAKPEAAVVTPTAAAVRGLKAFGARRISVLTPYTLETSRPMADYFLTLGFDIARFTCLGLSDDREMARISPDEIVAFAREATAPDCDALFISCTAVRAAGVAAEIEAAIGKPVITSNLATAWACLRLCGDAAPRPELGRLMTRAYPGR*