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SCNpilot_expt_1000_bf_scaffold_9459_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4109..4771)

Top 3 Functional Annotations

Value Algorithm Source
Putative amino-acid ABC transporter permease protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CN09_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 220.0
  • Bit_score: 421
  • Evalue 5.10e-115
  • rbh
Putative amino-acid ABC transporter permease protein {ECO:0000313|EMBL:EYR78342.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 220.0
  • Bit_score: 421
  • Evalue 7.10e-115
ectoine/hydroxyectoine ABC transporter permease EhuD; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 220.0
  • Bit_score: 405
  • Evalue 1.20e-110
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGAATGGGACTGGAACTTCGTCTGGCAGATCATGCCGACCCTCATCGAGGGCCTGAAGATCACGATCCTTGCGACCGTGCTCGGCGCCGCCCTTGCCGCCGCCGTCGGCCTCCTCTTCGCGATCCTGCGCATGACCGCGCCGAAGCCCGTCGCGAAGGTGACAGGCTTCGTGGTCGAGTTCATCCGCGGCACGCCGCTGCTCGTGCAGCTCTATTTCATCTTCTATGTGCTGCCGGACGTGGGCATCCGCCTGCCGGCGCTCGCGGCCGGCGTCATCGGGCTCGGCCTGCACTACGGTACCTATGCCGCGGAGGTCTACCGCGCCGGCATCGAGAACGTGCCGCGCGGCCAGTGGGAGGCGGCGAAGGCGACGAACCTCACCGGCCGGCAGACATGGATCCATGTGGTGCTGCCGCAGGCGATCCCGCCGATGATCCCGGCGCTCGCCAACTACCTGATCGCCATGTTCAAGGAGACGCCGCTGCTCTCCGCGATCACGGTGCTCGAACTGATGAACCAGGCCAAGAGCGTCGCCAACAGCAGCTATCGCTACATCGAGCCGATGACGCTGGTCGGGGTGTTCTTCCTGGTCATGAGCCTGATCTCCGTCGTCTTCCTGCGCTGGCTGGAAGAACGCTATGCCCGCGTGGAGGAACGCTGA
PROTEIN sequence
Length: 221
MEWDWNFVWQIMPTLIEGLKITILATVLGAALAAAVGLLFAILRMTAPKPVAKVTGFVVEFIRGTPLLVQLYFIFYVLPDVGIRLPALAAGVIGLGLHYGTYAAEVYRAGIENVPRGQWEAAKATNLTGRQTWIHVVLPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKSVANSSYRYIEPMTLVGVFFLVMSLISVVFLRWLEERYARVEER*