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SCNpilot_expt_1000_bf_scaffold_9459_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4774..5433)

Top 3 Functional Annotations

Value Algorithm Source
Putative amino-acid ABC transporter permease protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX44_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 219.0
  • Bit_score: 390
  • Evalue 1.30e-105
  • rbh
Putative amino-acid ABC transporter permease protein {ECO:0000313|EMBL:EYR78343.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 219.0
  • Bit_score: 390
  • Evalue 1.80e-105
glnP; glutamine ABC transporter permease; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 219.0
  • Bit_score: 384
  • Evalue 2.20e-104
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGACCGACTGGTCCGGCTACATAGGTCTGATCCTGCAAGGCGCGCTGGTGACGGTGGAACTCACCGTCATGGGCTCGGTGCTGGCCGTCGTCATGGCGTTCGCCGCCGGGCTCGGCCGCGTCAGCCGCTTCATCGCGGTCAGGGCGCTGGCCACGACCTATATCGAATTCTTCCGCGGCACGTCGATCTTCGTGCAGCTCTTCTGGGCCTATTTCGTGCTGCCCTTCGCGGGGATCACGCTGTCGCCGCTGCAGGCCGGGGTGCTGGCGCTGGGGCTGAATGTCGGGGCCTACGGGGCGGAGGTCGTGCGCGGCGCGGTCAAGGCCATCGGCCGCGAGCAGCGGGAGGCCTGCATCGCGCTGAACCTGACGCGCAGCCAGGCGATGCGCCACGTCATCCTGCCGCAGGCGCTGCCTTTGATGCTGCCGACCTTCGGCAACAATGCGATCGAACTGCTGAAGGCCACGGCCGTGGTCTCGCTGATCTCGCTCACCGACATGACCTTCCAGGCGCAGGTCGTGCGCGCGCAGACCGGCAGCACGCTGATCCCCTTCACGGTCATCCTCGTGCTCTATTTCCTGATGGCGCTCGCCATCTCCTACGGCATGCGCTGGCTGGAGCGCCGGGTCACCCGCGGCCTCGACGGTGTGAGGACCTGA
PROTEIN sequence
Length: 220
MTDWSGYIGLILQGALVTVELTVMGSVLAVVMAFAAGLGRVSRFIAVRALATTYIEFFRGTSIFVQLFWAYFVLPFAGITLSPLQAGVLALGLNVGAYGAEVVRGAVKAIGREQREACIALNLTRSQAMRHVILPQALPLMLPTFGNNAIELLKATAVVSLISLTDMTFQAQVVRAQTGSTLIPFTVILVLYFLMALAISYGMRWLERRVTRGLDGVRT*