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SCNpilot_expt_1000_bf_scaffold_9459_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5648..6241)

Top 3 Functional Annotations

Value Algorithm Source
ectoine/hydroxyectoine ABC transporter solute-binding protein; K02030 polar amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 197.0
  • Bit_score: 381
  • Evalue 1.60e-103
  • rbh
Ectoine/hydroxyEctoine ABC transporter solute-binding protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UFT2_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 197.0
  • Bit_score: 381
  • Evalue 5.20e-103
  • rbh
Ectoine/hydroxyEctoine ABC transporter solute-binding protein {ECO:0000313|EMBL:ABR62512.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 197.0
  • Bit_score: 381
  • Evalue 7.30e-103

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
TACGGCGCGATGATCCCCGGCCTCCAGGCCGGCCGCCACGACGTCATCACCGCCGGCCTCTTCATGAAGCCGGAGCGCTGCGCGGCGGTCGCCTATTCCGAGCCGATCCTGTGCGATGCCGAGGCCTTCGCGCTGAAGAAGGGCAATCCGCTCGCCCTCAAGAGCTACAAGGACATCGCCGACAATCCCGATGCGAAGATCGGCGCGCCGGGCGGCGGCACGGAAGAAAAGCTGGCGCTGGAAGCCGGCGTGCCGCGCGATCGCGTCATCGTCGTGCCGGATGGCCAGAGCGGCCTGAAGATGCTGCAGGACGGCCGCATCGACGTCTACTCGCTGCCGGTGCTGTCGATCAACGACCTCGTTTCGAAGGCGAACGATCCGGGCATCGAGGTCGTGGCGCCGGTCGAGGGCGCACCGGTCTATTGCGACGGCGCCGCCTTCAGGAAGGGCGACGAGGCCCTGCGCGACGCCTTCGACGTGGAACTCGCCAAGCTGAAGGAATCGGGTGAGTTCGCCAAGATCATCGAGCCCTACGGCTTCTCCGCCGCGGCAGCGATGTCGACGACCCGCGAAAAGCTCTGCGCGGCGCAGTGA
PROTEIN sequence
Length: 198
YGAMIPGLQAGRHDVITAGLFMKPERCAAVAYSEPILCDAEAFALKKGNPLALKSYKDIADNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSINDLVSKANDPGIEVVAPVEGAPVYCDGAAFRKGDEALRDAFDVELAKLKESGEFAKIIEPYGFSAAAAMSTTREKLCAAQ*