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SCNpilot_expt_1000_bf_scaffold_5681_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3300..3872)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent protease subunit HslV n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXZ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 186.0
  • Bit_score: 345
  • Evalue 3.10e-92
  • rbh
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 186.0
  • Bit_score: 345
  • Evalue 4.30e-92
hslV; ATP-dependent protease peptidase subunit (EC:3.4.25.-); K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 328
  • Evalue 1.20e-87
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAGTGAACACGATCCCTACGCTTCCATGCACGCCACGACGATCATCACCGTCCGCAAGGACGGAAAGGTGGTCATGGCGGGCGATGGCCAGGTGAGCCTTGGCCAGACTGTCATGAAGGGCAATGCGCGAAAGGGCCGCCGCCTCGCCAAGGGCGACGTGATCGCCGGTTTCGCCGGCGCGACCGCCGATGCCTTCACGCTGCTCGAACGGCTCGAAGCCAAGCTGGAGCAATATCCCGACCAGCTCATGCGCGCCGCCGTCGAGCTTGCCAAGGACTGGCGCACCGACCGGTACCTGCGCCGCCTAGAGGCGATGATGCTGGTCGCCGACAAGTCCGTCACGCTGGCGCTGACCGGCAACGGCGACGTGCTGGAGCCGGAGCACGGCACCATGGCGATCGGTTCGGGCGGCAACTACGCCTATGCCGCCGCCCGCGCGCTGATGGATACCGACAAGTCGGCCGAGGAGATCGCGCGCCGGGCCATGCNNNNNNNNNNNGACATCTGCGTCTACACCAACCACAATGTCGTGGTGGAAATGCTGGATGCCGACCGCCCTTCCGGCCGGTGA
PROTEIN sequence
Length: 191
MSEHDPYASMHATTIITVRKDGKVVMAGDGQVSLGQTVMKGNARKGRRLAKGDVIAGFAGATADAFTLLERLEAKLEQYPDQLMRAAVELAKDWRTDRYLRRLEAMMLVADKSVTLALTGNGDVLEPEHGTMAIGSGGNYAYAAARALMDTDKSAEEIARRAMXXXXDICVYTNHNVVVEMLDADRPSGR*