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SCNpilot_expt_1000_bf_scaffold_9710_curated_14

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(8576..9544)

Top 3 Functional Annotations

Value Algorithm Source
phaZ1; poly(3-hydroxyalkanoate) depolymerase C (EC:3.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 325.0
  • Bit_score: 432
  • Evalue 1.30e-118
  • rbh
Poly(3-hydroxyalkanoate) depolymerase C n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X2Z6_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 325.0
  • Bit_score: 432
  • Evalue 4.20e-118
  • rbh
Poly(3-hydroxyalkanoate) depolymerase C {ECO:0000313|EMBL:AFL50252.1}; EC=3.1.1.- {ECO:0000313|EMBL:AFL50252.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 325.0
  • Bit_score: 432
  • Evalue 5.90e-118

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
TTGGCGGCGTGGCAGCATATCCCGAAGCAATTGCCGGCGGCACCGCCCCTGGTGGTCGTGCTGCACGGCTGCACGCAGACCGCCGCCGGTTATGATGCCGGCTCCGGCTGGTCGGCGCTTGCGGAAGACTACGGCTTTATGGTGCTCTTTCCCGAACAGAACAGGCAGAACAATGCGAACCTGTGTTTCAACTGGTTCAATGCCGCGGACACCCGACGAGACCAGGGCGAAGCGCGCTCCATCCGGCAGATGATCGCCTCTGTCGTCGCCGACCATGGCATCGATGAGCGCCGGATCTACATCACCGGCCTTTCCGCCGGGGGCGCCATGGCAAACGCCATGCTGGCCTGCTACCCGGAGGTCTTTGCCGGCGGCGCCATCATCGCCGGCCTGCCCTATGCCGCCGCCTCGACCGTTCCCGAGGCATTCGACCGCATGCGCGGCCAAGGTCTTCCCGGCGCGAGCCGCCTCCAGGCAAGCCTTCGCGCTGCCTCGCGACATGACGGCGCCTGGCCGACGGTTTCCGTCTGGCACGGCACGAGCGACAACACGGTGGCTCCGGACAATGCGTCCGCGATCGTCGCGCAATGGCGCGGCGTCCATGCGGTTGCCGACCAGCCGACGGAGGTCGAGGCGATCGATCGGCATTCACGATCCGTATGGCGCGACGACCGCGGCATGGAGGCAATCGAGCTCTACAGGATTTCCGGCATGGGGCACGGCACGCCGATCGACACGTCCAGTGGCTATGGCAGGGCCGCACCCTTCATGCTCGACGTCGGCATGTCCTCGACGGTGCAGATCGCAAGAAGCTGGGGCCTTGCCGCTTCCTTCGAGCGCCGCGACCGACCACGTGCCTCGCCGCCCGCAGAAAGAGCGGCAGCGCAGCAGCCCCTGTCGGGCGGCTCCGGCAACGGCATCCAGTCGGTGATCGAGAACGCGCTGCGTTCCGCAGGCTTGATGAAGTGA
PROTEIN sequence
Length: 323
LAAWQHIPKQLPAAPPLVVVLHGCTQTAAGYDAGSGWSALAEDYGFMVLFPEQNRQNNANLCFNWFNAADTRRDQGEARSIRQMIASVVADHGIDERRIYITGLSAGGAMANAMLACYPEVFAGGAIIAGLPYAAASTVPEAFDRMRGQGLPGASRLQASLRAASRHDGAWPTVSVWHGTSDNTVAPDNASAIVAQWRGVHAVADQPTEVEAIDRHSRSVWRDDRGMEAIELYRISGMGHGTPIDTSSGYGRAAPFMLDVGMSSTVQIARSWGLAASFERRDRPRASPPAERAAAQQPLSGGSGNGIQSVIENALRSAGLMK*