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SCNpilot_expt_1000_bf_scaffold_2043_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1283..1816

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator {ECO:0000313|EMBL:KJB93192.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 177.0
  • Bit_score: 297
  • Evalue 9.60e-78
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 177.0
  • Bit_score: 287
  • Evalue 2.90e-75
Transcriptional regulator, TetR family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTR1_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 177.0
  • Bit_score: 287
  • Evalue 9.30e-75

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGGGCCGGAAGCCGACAATCACGCGCGAGGGACTGCTCGAAATTGCCGAGGCGATCGTTCGCAACGACGGCGCGGCCGCCCTCACCATCGACGCCCTGGCGAGGGCCGCGGGCATCTCGAAGGGCGGCGTGCAGTATTCCTTCGCCTCGAAGGACGACCTGGTGCGCGCGCTGGTCCGGCGATGGACATACCGGTTCGACGAGATGCTGGGCGCCATGGACGGCGCTTCGCCGGCCGATCTCGTTCGAAGATACATCAGGGTCATGCGCAGTTCGCAGGAGGCCATGAACGCCAAGATGGCCGGCCTGATGATCGCCTATATCCAGAATCCGCAGAATCTCGAAGAAACGCGCCAGTGGTATCGTTCCATGTTCGAGCGCCTGGGCGGCGAAACGAAGGACGCGCAGGCGGCCCGTGTCGCGCTGCTGGCGGTCGAGGGCCTGTTCCTGCTGCGCATCGCCGGCATAGACGAGGACGGGGAATGGAGCGGCTTTCTCGACGACGTGGAGAGCGTGATCGATCGCCTGCTGTAG
PROTEIN sequence
Length: 178
VGRKPTITREGLLEIAEAIVRNDGAAALTIDALARAAGISKGGVQYSFASKDDLVRALVRRWTYRFDEMLGAMDGASPADLVRRYIRVMRSSQEAMNAKMAGLMIAYIQNPQNLEETRQWYRSMFERLGGETKDAQAARVALLAVEGLFLLRIAGIDEDGEWSGFLDDVESVIDRLL*