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SCNpilot_expt_1000_bf_scaffold_2043_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2959..4602

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000375B44B similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 543.0
  • Bit_score: 785
  • Evalue 4.40e-224
  • rbh
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 546.0
  • Bit_score: 769
  • Evalue 7.80e-220
  • rbh
Sodium:proton antiporter {ECO:0000313|EMBL:KEA03575.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 546.0
  • Bit_score: 769
  • Evalue 3.50e-219

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
ATGGAGAGTATCGGTATCGCGCTGATCCTGTTGCTGGCGGTGGTGGTGAGCGGGACGCTTGCGCGCCTCTCCCCCGTCGCCATTCCCCTGCCGCTGGTGCAGATCGCGCTCGGCGCGGCGATCGCCGGCGTCACCGGGTCCAGCGTGCAGCTCGAACCGCATATCTTTTTCCTGCTCTTCCTGCCGCCGCTCCTCTTCCTCGACGGCTGGCGCATTCCCAAGGACGGGCTGTTCCGCGACAAGGGAACGATCCTCGAACTCTCGCTCGGCCTCGTGGTCTTCACCGTGATCGGGGTCGGCTTCTTCATCAACTGGATGATCCCGTCGATGCCGCTGCCCGTCGCCTTCGCGCTGGCGGCCATCGTTTCCCCGACGGACCCGATCGCCGTCTCGGCGATCACCGCCCGCGTGCCGATGCCGCATCGCCTGATGCACATCCTGGAAGGGGAATCCCTCCTGAACGACGCCTCGGGCCTCGTCTGCATGCGCTTTGCCGTCGCCGCCACCCTCACCGGGGTGTTCTCGCCGGTCGCCGCGCTCGGCACCTTCCTCTGGCTCGCCATCGGCGGCATCGCCATCGGCGCCGGCGTGACCTGGGTCGTGATGAAGGCCAAGGATCACCTTTCCCGCAAGCTCGGCGAGGAGCCGGGCTCGCAGATCCTCATCAGCCTGCTCATTCCCTTCGGCGCCTATCTGCTGGCGGAAGAGCTTCATTGCTCCGGCATCCTGGCGGCCGTCGCCGCCGGCATCAAGATGAGCTATGCGGAACAGACCGGCCAGACCCTTGCCGTGACGCGCGTGCGCCGCACCGCCGTCTGGGACACCGTGCAGTTCTCCCTGAACGGCGTCATCTTCGTGCTGCTCGGCGAACAGTTGCCGAGCATCGTCGCCGGCGCGGCGCAGGTCGTCATGGACACCGGCCATCACGAACCGATCTGGCTGGCGGTCTATGTGGTGGCGATCAACGTCGCGCTGGCGCTGCTGCGCCTGCTCTGGGTCTGGATATCGCTGCGCTTCACCCTCTATCACGCCGCGCGGCAGGGGCGGACGGTGACGAGGCCGGACTGGCGGCTGGTGGTGGCGGTGTCGGTCGCCGGCGTGCGCGGCGCCATAACGCTCGCCGGCATCCTCACGCTGCCGCTCGTGCTTGACGACGGAACGCCGTTTCCGGCGCGCGACCTCGCCATTTTCCTGGCGGCGGGCGTCATCATCGCCTCGCTCGTGGCCGCCAGCATCGGGCTGCCGTTCCTGCTGCGCAACCTGGAACTGCCGCCGGAACCGGACCACCAGCGCGAGGAGGATGCGGCGCGCATCGCGGCGGCGGAAGCGGCGATGCGCATGATCGAAAGGTTGCAGCACGAGCTGGGCGAAGGCCGCGGCAATGTCGACCTTTATGCCGATGTCGGAAGCCGGCTGATGGAACTCTACCGCAAGAGGATCGACACCCGCTCGAAGACCGGCGACGAGGCCGAGCAACTGAAGCACCTGGAGGAGATCGAGCGGCGGCTGCGCCTTGCCGGGGTGAGAGCCGAGCGGGACGAAATCTACCGCCTCGGACGCGCCCGCAAGCTCTCCGACGACCTCGTGCGCAAGCTCGTGCGCGAGGCGGACCTGATGGAGGCCCGCTACATGGCCGCCGGATAG
PROTEIN sequence
Length: 548
MESIGIALILLLAVVVSGTLARLSPVAIPLPLVQIALGAAIAGVTGSSVQLEPHIFFLLFLPPLLFLDGWRIPKDGLFRDKGTILELSLGLVVFTVIGVGFFINWMIPSMPLPVAFALAAIVSPTDPIAVSAITARVPMPHRLMHILEGESLLNDASGLVCMRFAVAATLTGVFSPVAALGTFLWLAIGGIAIGAGVTWVVMKAKDHLSRKLGEEPGSQILISLLIPFGAYLLAEELHCSGILAAVAAGIKMSYAEQTGQTLAVTRVRRTAVWDTVQFSLNGVIFVLLGEQLPSIVAGAAQVVMDTGHHEPIWLAVYVVAINVALALLRLLWVWISLRFTLYHAARQGRTVTRPDWRLVVAVSVAGVRGAITLAGILTLPLVLDDGTPFPARDLAIFLAAGVIIASLVAASIGLPFLLRNLELPPEPDHQREEDAARIAAAEAAMRMIERLQHELGEGRGNVDLYADVGSRLMELYRKRIDTRSKTGDEAEQLKHLEEIERRLRLAGVRAERDEIYRLGRARKLSDDLVRKLVREADLMEARYMAAG*