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SCNpilot_expt_1000_bf_scaffold_2043_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(12283..13152)

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZX3_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 312.0
  • Bit_score: 271
  • Evalue 8.60e-70
ABC transporter monosaccharide permease {ECO:0000313|EMBL:GAN77432.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 324.0
  • Bit_score: 252
  • Evalue 7.50e-64
ABC transporter permease (EC:3.6.3.17); K02057 simple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 314.0
  • Bit_score: 250
  • Evalue 6.40e-64

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Taxonomy

Acidisphaera rubrifaciens → Acidisphaera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
GTGCTGATGATGGCGGTGGCGCTGTTCGCCGGCTTCGCCCTCGCGCTCGACGGCTTTACCGCCCCGGCCAACCTCCTCAACATCGTGCGGAGCGTTTCCGTCCTGGGGATCCTCGCCGCGGGCATGGGCATCGTGGTCATCGGACGGGGCATCGACCTGTCCATGGTGTCGATCATGGTCGTCACGGTCGCCATCCAGCTCCAGCTTCTCCAGGCGGGATGGTCGCTCTGGTCCGCCAGCGCCGTGGTGGCCGCCATCACGCTGGCGCTCGGCTTCATGAACGGTTTCATGGTGGCCTATGCCGGCGTCTCGGCCCTGTTCGCGACGCTCGCGTCCAGCGCCTTCGTCTTCGGCTTCGTGCGCTCGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGGTGGCGCTGGTGCTGCTGCGCTGGTCGCGGCCGGGCCGCTTCCTCTACCTGATGGGCGACAATTTCCAGGCGGCGCGCACCATGGGCATTCCCGTCCGCCCGCTGATCGTCGCCTCCTTCATGGCGAGCGCCCTGCTTGCCTGGCTTGCGGGCGTGGCGAGCGCCGTCAGCCTGCAGAGCATGAACACGCGCCTCGTCAATTCGGCGCTTCTCTACGATGTCGTGCTGGTCGTGGTGATTGGCGGCATCGGCCTTTCGGGCGGCAAGGGCGGCATGCGCAACGTGGTGGTGGGCGCGCTGCTGATCGGCATCCTGCTCAACGGCATGACCATCCTCAACCTGCCCAACATCCACCAGAATCTCATCAAGGCGCTGATCCTCCTCGGGGCGATCATCCTCGACGGGCAACTCAATCCCCGCGACGAGCAGACCAGTCAGCAGGGCGACATCTAG
PROTEIN sequence
Length: 290
VLMMAVALFAGFALALDGFTAPANLLNIVRSVSVLGILAAGMGIVVIGRGIDLSMVSIMVVTVAIQLQLLQAGWSLWSASAVVAAITLALGFMNGFMVAYAGVSALFATLASSAFVFGFVRSRXXXXXXXXXXXXXXXAVALVLLRWSRPGRFLYLMGDNFQAARTMGIPVRPLIVASFMASALLAWLAGVASAVSLQSMNTRLVNSALLYDVVLVVVIGGIGLSGGKGGMRNVVVGALLIGILLNGMTILNLPNIHQNLIKALILLGAIILDGQLNPRDEQTSQQGDI*