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SCNpilot_expt_1000_bf_scaffold_2043_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 15670..16596

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DU51_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 291.0
  • Bit_score: 279
  • Evalue 5.70e-72
HTH-type transcriptional regulator {ECO:0000313|EMBL:EJT06906.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 291.0
  • Bit_score: 279
  • Evalue 8.00e-72
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 249.0
  • Bit_score: 118
  • Evalue 4.10e-24

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Taxonomy

Rhizobium sp. CCGE 510 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGCAGGATCGGCATGAATCGGAGGGACCCGCGTTGGACGAGAGGCTGTTGAAAAGTTTCGTGACGACCGCCCAGCTCGGCAGCGTCACCTCGGCCGCCGAGCGGCTCAACCTTACCCAGCCGGCTCTGTCGCGGCAGATCCAGCGGCTCGAGCAGGAGCTCGGGCTGCCGCTCTTCCAGCGCAGCGGCCGCAACCTGCGCCTGTCGGTGCATGGCGACCGGCTGCTGGTCGATGCGCAGGCCGTCCTCGCCGCGAGCAAGCGCCTCCACGATGCGGTCGCCGAGATGCGCGAGGGCGAGTGCGGCCTGCTGCGCGTCGGCGCCTGTTCCCAGGTCATCGAGCGCCACATGAGCGAGGTGCTGCCCGCCTGGAAGCGGGACAATCCCAACATCGACATCCGCCTGGAGGAAGGCGGCGGGGCGGAGCTTGCGCGCCGCCTCGACGACAACGAACTGCATCTGGCGATCAACGCCCGCCATTTCGCGCGGCCCGATCGCTTCAGCCGCATCGACATCGGCGCCATGCGCGTGCGCGCCTTCTGCATCCCCTCGGTCTTCACCGCCGAACCGGGGGCCGTCACGCTGGCGCAGTTGTGCCGCCAACCGCTGCTCCTGCTCAATCGCTGGCATTTCACGCGCGAATTGCTCGAAACGGCCTGCCAGGCCGAAGGCTGCCTCGCGCAGCCGACCCTGGAATCCGGTTCGCCGCACACGCTGCTCGCCATCGCCAGGAGCAGCGGCGGCGTCGCCGTGGTGCCGCATCTGGGCACCGGTCCGGTGGAGGGCCTTCTCGCGCACGACATCCTGCACCGCGGCAGGCCGCTCGATTTCGAAATATCGGCCATCTGGCCCTCGGCCATGCCGCTGCCCGGCTACGGCCGCCGCTTCATCGCCTACCTGCGCGAATGCCTCCTGCCCGCATCCTGA
PROTEIN sequence
Length: 309
MQDRHESEGPALDERLLKSFVTTAQLGSVTSAAERLNLTQPALSRQIQRLEQELGLPLFQRSGRNLRLSVHGDRLLVDAQAVLAASKRLHDAVAEMREGECGLLRVGACSQVIERHMSEVLPAWKRDNPNIDIRLEEGGGAELARRLDDNELHLAINARHFARPDRFSRIDIGAMRVRAFCIPSVFTAEPGAVTLAQLCRQPLLLLNRWHFTRELLETACQAEGCLAQPTLESGSPHTLLAIARSSGGVAVVPHLGTGPVEGLLAHDILHRGRPLDFEISAIWPSAMPLPGYGRRFIAYLRECLLPAS*