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SCNpilot_expt_1000_bf_scaffold_2043_curated_23

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(20996..21886)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI000364C019 similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 295.0
  • Bit_score: 400
  • Evalue 1.60e-108
  • rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KGF82800.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 289.0
  • Bit_score: 400
  • Evalue 1.80e-108
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 286.0
  • Bit_score: 392
  • Evalue 1.10e-106
  • rbh

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Taxonomy

Massilia sp. JS1662 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
GTGAGCGCGCATCTCGAAGGCCCCGCCGGCCGCCGGCCGCAGCGCATGGGCGCAAGCCGCATCGCGATCTACGTCTTCCTCTTCCTGTCGGCGCTCTTCTTCATCATGCCGCTATACGTGATGGTCGTCACGTCGCTGAAGGACATGGCGGAGATCCGCCAGGGCAACATCTTCGCGCTGCCCGCCGCCCCGACCATCGCGCCCTGGATCAAGGCCTGGTCCGGCGCCTGCACCGGCCTCACCTGCGAGGGCGTCGGCGCGGGGTTCGTGAACTCGGTCCTGATCACGCTTCCGGCCGTCACCTGCTCGGTGTTCCTTGGCGCCATCAACGGCTATGCCTTGTCGTTCTGGCGGTTTCCGGGCGCCAATCTCGTCTTCGCCGTGCTGATGGCCGGCGCATTCATTCCCCTGCAGGTGTTCATATACCCGCTGGTGCGGATCGCCTCCGCGGCGGGCGTCTTCGGCACGTTGCCGGGCGTCATCCTGCTGCATATCTGCTTCAGCCTGCCGCTGATGACGCTGCTGTTCCGCAATTTCTACGGCAGCGTCCCGATGGACCTCTACAAGGCGGCCAGGGTCGACGGGGCCGGGTTCTGGCAATTGCTGATCCACGTCTTCGCCCCGATGTCGGTGCCGATCACCGTCGTGGCCTTCATCATCCAGATAACCGGCACCTGGAACGACTTCATCCTCGGCCTGATCTTCGCCGGCGCCGACAACATGCCGATCACCGTGCTGCTCAACAACGTGGTGAACTCGCAGTTCGGCGAGCGCGAATACAACGTCAACATGGCGGCCACCATCCTCACCGGCCTGGTGCCGCTGGTCCTCTACTTCCTGTCCGGGCGCTGGTTCGTCCGCGGCATCATGGCAGGAGCCGTCAAGGGATGA
PROTEIN sequence
Length: 297
VSAHLEGPAGRRPQRMGASRIAIYVFLFLSALFFIMPLYVMVVTSLKDMAEIRQGNIFALPAAPTIAPWIKAWSGACTGLTCEGVGAGFVNSVLITLPAVTCSVFLGAINGYALSFWRFPGANLVFAVLMAGAFIPLQVFIYPLVRIASAAGVFGTLPGVILLHICFSLPLMTLLFRNFYGSVPMDLYKAARVDGAGFWQLLIHVFAPMSVPITVVAFIIQITGTWNDFILGLIFAGADNMPITVLLNNVVNSQFGEREYNVNMAATILTGLVPLVLYFLSGRWFVRGIMAGAVKG*