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SCNpilot_expt_1000_bf_scaffold_2427_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5138..5458)

Top 3 Functional Annotations

Value Algorithm Source
2Fe-2S ferredoxin FdxB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZB9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 215
  • Evalue 2.70e-53
2 Fe-2S ferredoxin FdxB {ECO:0000313|EMBL:EYR80060.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 215
  • Evalue 3.80e-53
ferredoxin; K04755 ferredoxin, 2Fe-2S similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 106.0
  • Bit_score: 205
  • Evalue 6.70e-51

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGAGCAAACTCACCATCGTCGCCTTCGACGGCACGCGTCACGAACTGGATGTCGCCAACGGTTCCACCGTCATGGAGAATGCCGTGCGCAATTCCGTGCCCGGCATCGAAGCCGAGTGCGGCGGCGCCTGCGCCTGTGCGACCTGTCATGTCTATGTCGACGATGCCTGGAGCACCGCCGTCGGCCCGCCGGAAGCGATGGAGGAGGACATGCTGGACTTCGCCTACGACGTCCGGCCGACCTCGCGGCTCTCCTGTCAGATCAAGATGTCGGACGCGCTGGACGGGCTCGTGGTGCACGTCCCGGAACGCCAGGCCTGA
PROTEIN sequence
Length: 107
MSKLTIVAFDGTRHELDVANGSTVMENAVRNSVPGIEAECGGACACATCHVYVDDAWSTAVGPPEAMEEDMLDFAYDVRPTSRLSCQIKMSDALDGLVVHVPERQA*