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SCNpilot_expt_1000_bf_scaffold_1731_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6192..6830)

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxy-phosphogluconate aldolase Eda n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F021_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 212.0
  • Bit_score: 386
  • Evalue 1.30e-104
  • rbh
2-dehydro-3-deoxy-phosphogluconate aldolase Eda {ECO:0000313|EMBL:EYR80567.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EYR80567.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 212.0
  • Bit_score: 386
  • Evalue 1.90e-104
eda; 2-dehydro-3-deoxy-phosphogluconate aldolase Eda (EC:4.1.2.14) similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 212.0
  • Bit_score: 371
  • Evalue 1.40e-100
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGAGCGCGAAAAACGCCAAGCTGCTTTCCGTCCTGAAGCTTCAGCCGGTGGTGCCGGTGCTGGTCGTCGACGACGTCAAGACGGCGGTTCCGCTGGCGCGCGCGCTGGTCGCGGGCGGGCTGAAGGCGATCGAGATCACGCTGCGCACGACCGCCGCGCTGGAGGCCATCCGCGCGGTCGCCAACGAGGTCGAGGGCGCCGTCGCCGGTGCCGGCACGATCCTCAACGCCGCGCAGTACGAGGCGGCCGTCGAGGCGGGGTCGCAGTTCATCGTCAGCCCCGGCACGACGCAGGAACTGATCGACGCCGCGGCGGATTCCGAAATCCCGCTGCTGCCCGGCGCGGCCACCGCCAGCGAGGTCATGGGCCTTCGCGAGGAGGGCTACCAGGTCATGAAGTTCTTCCCGGCCGAACAGGCGGGCGGCGCGGCCTACCTCAAGTCGCTTTCCTCGCCGCTTGCCGGCACGCTGTTCTGCCCGACGGGCGGCATTTCCCTGTCGAATGCCCGCGACTACCTCTCGCTGCCGAACGTCGTGTGCGTCGGCGGCTCCTGGGTCGCGCCGAAGGAGCTTGTGGCCAAAGGGGACTGGGCGGGCATCGAGAAGCTCGCCGCCGAAGCTGCGGCCCTCAAAGGCTGA
PROTEIN sequence
Length: 213
MSAKNAKLLSVLKLQPVVPVLVVDDVKTAVPLARALVAGGLKAIEITLRTTAALEAIRAVANEVEGAVAGAGTILNAAQYEAAVEAGSQFIVSPGTTQELIDAAADSEIPLLPGAATASEVMGLREEGYQVMKFFPAEQAGGAAYLKSLSSPLAGTLFCPTGGISLSNARDYLSLPNVVCVGGSWVAPKELVAKGDWAGIEKLAAEAAALKG*