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SCNpilot_expt_1000_bf_scaffold_4659_curated_18

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(19211..20185)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI0003682DBA similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 316.0
  • Bit_score: 360
  • Evalue 1.60e-96
  • rbh
Urea amidolyase {ECO:0000313|EMBL:GAJ37525.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 307.0
  • Bit_score: 358
  • Evalue 8.40e-96
Urea carboxylase (EC:6.3.4.6) similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 323.0
  • Bit_score: 263
  • Evalue 8.20e-68

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Taxonomy

Bradyrhizobium sp. DOA9 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAGTACGCATTCCATCACCGTCCTGAAACCTGGCCTTGAGACCACGGTTCAGGAACTGCCGGGCCGGATCGGTTACCTGGAGCAGGGGTTCCCCGTTTCCGGTCCTTTCGACAAGTGGTCGTTCCGGCAGGCGAACCTGCTGGCCGGGAACCCGCGCGATGCCGCGGCGCTCGAATGCCAGTTCCTCGGCCCCGCGCTGCGCTTCGAGTGCGACGCCGTGGTCGCGGTCACCGGCGCGGACATGCGCCCGAAACTCGACGGCCAGCCGGTGCCGATGTGGCAAAGCGTGCCGGTCGCCGCCGGACAGGTCCTGGAACTTGCCGCCGCCTATACCGGCGCGCGCGGCTACATCGCCGTCTCCGGCGGCATCGACACGCCCGTCGTGCTCGGCTCGCGCGCCGTGTTCCACATGGCGCGGGTCGGCGGCCAGGCGCTGGCGAAGGACCAGATCCTTCCGCTCGGCGCGCAGCCCACGGGTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTTCCCTACCGACAGGACATGGCAGATCGAGGCGCTCGCCGGGCCGAACGACGACTGGCTGGACGACGCCTCGGTGGAGATGTTCTTCTCCGCCGACTGGTCGGTCCAGGCCAAGAGCAACCGCACGGGAATTCGCCTCACCGGGCCCGAATTCGGCTTTGCCGGGCGGGCGCTGTCGAAGGGCAGCGACCACGGCCAGGATCCCTCCAACATCATCGACCATGGCTATCCGCTGGGCGCCGTGAACCTGGCGGGCCAGACGCCCATCATCCTCGTCAACGATGCCCCGAGCACCGGCGGCTTCATCAATCCCTTTACCGTGGCCAGCGCTGCGTTCTGGAAACTCGCGCAGGCCAAGCCCGGCGACATCCTCCGTTTCCGCCGGGTCGACCGCGAGGAAGCGGCCCGCCTTCGCGCCACGCTCGAAACGGTGACAAGTGCAGGAGTGACCGTTCGTGTCTGA
PROTEIN sequence
Length: 325
MSTHSITVLKPGLETTVQELPGRIGYLEQGFPVSGPFDKWSFRQANLLAGNPRDAAALECQFLGPALRFECDAVVAVTGADMRPKLDGQPVPMWQSVPVAAGQVLELAAAYTGARGYIAVSGGIDTPVVLGSRAVFHMARVGGQALAKDQILPLGAQPTGPXXXXXXXXXPFPTDRTWQIEALAGPNDDWLDDASVEMFFSADWSVQAKSNRTGIRLTGPEFGFAGRALSKGSDHGQDPSNIIDHGYPLGAVNLAGQTPIILVNDAPSTGGFINPFTVASAAFWKLAQAKPGDILRFRRVDREEAARLRATLETVTSAGVTVRV*