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SCNpilot_expt_1000_bf_scaffold_4376_curated_24

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 22084..23940

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase {ECO:0000313|EMBL:EYR78522.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 594.0
  • Bit_score: 591
  • Evalue 1.90e-165
Two component sensor kinase/response regulator hybrid n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PYL0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 612.0
  • Bit_score: 580
  • Evalue 2.40e-162
  • rbh
two component sensor kinase/response regulator hybrid similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 623.0
  • Bit_score: 545
  • Evalue 2.10e-152
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1857
GTGGATGAGAAGGTCGCCGGGATCAGGCGGGCGGTTTTCGGTATCGTCGACACCTTCGATGCGATCGAGGCCAGGAAGCCGGTTTCCCAAACGGCATTCGCCGGGATCGACCGGATCCTCGAGCAGACGGTCGAGAAGACGGACGATCTGCTGCTTTACACCAACAACGCGGTCAGCATCGCCCGGACCGAGAACCGTGCGGAAGTGCTCGACATGCAGGTCAAGACCGCCGGCCTGATCGTTCTTCTGGTATGCTGCGTCCTTTTCCTCATCGTCACGCTGCGCCGGCAATTGCGGTCGGTGAAGCGCGCCGCTCTCGACCTCGAAGAGCTCAGCAACAAGCTCGTCGAATCCTATCAGGCCGCGGAGGCGGGCAACCGGGCAAAGTCGCAGTTCATGGCCACCATGGGCCATGAGATCCGCACGCCGCTCAATGCCATTCTCGGCACGGCGGAACTGCTCGAACTGACACCCCTGCCGGCGGAGGTCGAGCCGGGCGTACAGACCATCCGCCGCTCGGGGGCGGCTCTCCTCGAAACCATCAACGAGATTCTCGACTTCGCCAAGATCGAGTATAACAGGATCGACATCGATCTTCGGCCCGTCGACCTCAAATCCCTCGCCGAAGCGACGGTGGAGATGATCCGCGACAGGGCGCTCGAACGCGGCAATCGCGTGGAGCTCGTCCTGCCCGGGACCTTCCTCGCCCCCACGGTGGAGGCCGATCCGACACGGCTGCGGCAGGTGATGCTCAACCTGCTGAGCAATGCGGTGAAGTTCACCAGGGACGGGACCGTGACGCTGCGGATCGCGGAACAGTCGAGCGGCGGCAGGCTCGTTCTGCAGGGAGAGGTCTCGGACACCGGCATCGGCATCGATCCGTCCAGCATGGACAAGCTCTTCCGTCCGTTCTCCCAGGTCGATGCGTCGATCGGCAGGGAATATGGCGGAACCGGCCTCGGCCTGACCATCTGCAAGCAGATCGTCGAGGCCATGGGCGGGCAGATCGGCGTGCAGAGCAAGCTGGGCGAGGGGAGCACCTTCTGGTTCGAGGTGCCGGTCGCCCCGGCTTCCCGCGCTATGGACGAGGAGGCTTCCGGCGAAAAGGTTGAGGAAGCCCTGCCGGTGCTCCGGATTCTCCTGGTCGAGGACAACCTTGTCAACCAGCAGGTCGCGGCCGGCTTCCTGCGCCATCTCGGGCAGCACGTCACCATTGCGAACGACGGCCTGGAGGGCGTGCAGATCGCCGAAGCGGAAGAGTTCGACCTGGTTCTCATGGACATGCAGATGCCGCGACTGGACGGCATCGAGGCCGCGCGGCGGATGCGTGCCATTCCCGGCAAGCCGGCGGACCTGCCGATCGTCGCACTGACCGCCAACGCTTCCGACGACGACAGGCGGCTGTGCGCGGAGGCGGGCATGACCGACTTCCAGAGCAAGCCGGTGACGATGCAGCAGCTCCGCAAGATCATCGGCCGCTGCCGCAAGCTTGCGACCACCGCGGATCGCCCCCTGCCGCTCGTCCCGGGCGCCGCGCCCACGGTCGATGCCGACGCCTTCATGCTGCGCCGCGCCGAAATGGTGGAGGCGCTGGGCGAGGAGACTTTCGCCGAGCTCCTGGAGAGCTTCTTCGACGACGCCACGACTGTTCTTTCCCATCTCCACGATGCGCTGGCCGGCGGCGATGCAACGAAGATCGACCGCCTGCTCCACACGCTCAAGGGAGCCGCGGCGAGCGTGGGCCTGACGGAAATCGCCACGGTGTCACAGGAATTCAGGAAGGCCGACCTGACGAACGGCCGCCTCGATCAACTCACAAAGCTCGTAAGAGACAATCATCGGCAGTATGCCGCTTGA
PROTEIN sequence
Length: 619
VDEKVAGIRRAVFGIVDTFDAIEARKPVSQTAFAGIDRILEQTVEKTDDLLLYTNNAVSIARTENRAEVLDMQVKTAGLIVLLVCCVLFLIVTLRRQLRSVKRAALDLEELSNKLVESYQAAEAGNRAKSQFMATMGHEIRTPLNAILGTAELLELTPLPAEVEPGVQTIRRSGAALLETINEILDFAKIEYNRIDIDLRPVDLKSLAEATVEMIRDRALERGNRVELVLPGTFLAPTVEADPTRLRQVMLNLLSNAVKFTRDGTVTLRIAEQSSGGRLVLQGEVSDTGIGIDPSSMDKLFRPFSQVDASIGREYGGTGLGLTICKQIVEAMGGQIGVQSKLGEGSTFWFEVPVAPASRAMDEEASGEKVEEALPVLRILLVEDNLVNQQVAAGFLRHLGQHVTIANDGLEGVQIAEAEEFDLVLMDMQMPRLDGIEAARRMRAIPGKPADLPIVALTANASDDDRRLCAEAGMTDFQSKPVTMQQLRKIIGRCRKLATTADRPLPLVPGAAPTVDADAFMLRRAEMVEALGEETFAELLESFFDDATTVLSHLHDALAGGDATKIDRLLHTLKGAAASVGLTEIATVSQEFRKADLTNGRLDQLTKLVRDNHRQYAA*