name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4376_curated_1
unknown
|
Not on your lists |
979..1404
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1327..2130)
|
Polyamine ABC transporter permease {ECO:0000313|EMBL:KJC45104.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
polyamine ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI000375ECC4
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2135..2767)
|
Polyamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM33521.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
binding-protein-dependent transport system inner membrane protein
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036CAC63
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3339..4184)
|
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM32537.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Novispirillum itersonii RepID=UPI00035F33E7
rbh
Extracellular solute-binding protein, family 1
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_5
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4417..5529)
|
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUP9_9RHIZ
rbh
potA9; Spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31)
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_6
unknown
|
Not on your lists |
comp(5563..5703)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_7
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria
|
Not on your lists |
5714..6574
|
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SJZ0_9RHOB
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_8
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7363..8853
|
Carnitine dehydratase {ECO:0000313|EMBL:KJE52541.1}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037189EC
rbh
aldehyde dehydrogenase family protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_9
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8905..9795
|
LysR family transcriptional regulator {ECO:0000313|EMBL:KJK13136.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
LysR family transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S8S1_9BURK
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10156..10677
|
regulatory protein MarR
Transcriptional regulator, MarR family n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136J2_RHOPS
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABE39997.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10674..11450
|
hypothetical protein
rbh
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136J3_RHOPS
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE39996.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11472..11813
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136J4_RHOPS
Uncharacterized protein {ECO:0000313|EMBL:ABE39995.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_13
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11974..12366)
|
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGD96966.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036B436C
regulatory protein ArsR
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_14
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12434..13726
|
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGD96967.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
sulfide-quinone reductase
rbh
Sulfide-quinone oxidoreductase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FZ7_MESSB
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_15
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13757..13960
|
Sulfurtransferase {ECO:0000313|EMBL:KGD96968.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
sulfurtransferase n=1 Tax=Methyloferula stellata RepID=UPI0003800316
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_16
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13980..14993
|
membrane fusion protein
rbh
Membrane fusion protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AZW8_9RHIZ
rbh
Membrane fusion protein {ECO:0000313|EMBL:AGK56744.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14990..18196
|
Nodulation protein NolG {ECO:0000313|EMBL:EYR79398.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Nodulation protein NolG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGX1_9RHIZ
rbh
acriflavin resistance protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_18
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18243..19124)
|
agpT; AraC family transcriptional regulator
Transcriptional regulator AraC family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3G5_AGRVS
Transcriptional regulator AraC family {ECO:0000313|EMBL:ACM39413.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_19
unknown
|
Not on your lists |
19462..19695
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_20
unknown
|
Not on your lists |
19824..19919
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_21
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20057..20791
|
DNA-binding protein with HTH domain-containing protein n=1 Tax=Rhizobium sp. CF122 RepID=J3BL80_9RHIZ
rbh
DNA-binding protein with HTH domain-containing protein {ECO:0000313|EMBL:EJL53731.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
regulatory protein luxr; K07782 LuxR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21232..21750
|
Uncharacterized protein {ECO:0000313|EMBL:EYR78521.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003808CF3
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_23
unknown
|
Not on your lists |
comp(21687..21956)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22084..23940
|
Signal transduction histidine kinase {ECO:0000313|EMBL:EYR78522.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Two component sensor kinase/response regulator hybrid n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PYL0_9RHIZ
rbh
two component sensor kinase/response regulator hybrid
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23951..25063
|
Response regulator {ECO:0000313|EMBL:EYR78523.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Response regulator protein; K07814 putative two-component system response regulator
rbh
Response regulator protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JQV8_AGRVS
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4376_curated_26
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25369..26514
|
methyl-accepting chemotaxis sensory transducer with Cache sensor; K03406 methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=8 Tax=Rhizobium meliloti RepID=F6BMR9_SINMB
Chemoreceptor methyl-accepting chemotaxis transmembrane protein {ECO:0000313|EMBL:CDH85883.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
|