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SCNpilot_expt_1000_bf_scaffold_4376_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2135..2767)

Top 3 Functional Annotations

Value Algorithm Source
Polyamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM33521.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 209.0
  • Bit_score: 269
  • Evalue 3.30e-69
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 209.0
  • Bit_score: 264
  • Evalue 3.10e-68
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036CAC63 similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 209.0
  • Bit_score: 264
  • Evalue 7.60e-68

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGGTCACATTGGCCTGCCTGTTCCTCGGCTTTCCCGTCGCTGTCCTTCTGACCACGAGCAGCGAGAAGGTGGCCGATACCATCCTGGTCCTGGTGATGTTGCCGTTCTGGACCTCGTTGCTGGTGCGAACGACCGCCTGGATCGTGCTCCTGCAGAAGGAGGGGATCATCAACGGGGTCCTGCTGTCGCTCGGCTTGATCGCAGAGCCCTTGACGATGATCTTCAACAGGACCGGTGTGGTCATCGCGATGACCCATGTGCTGCTGCCGTTCATGATCCTGCCGCTCTACGGCACTCTGAAGGCCATTCCGCGTGGATACATGCGCGCCGCCGCGAGCCTTGGGGCCCGCCCGTTCACCGCGTTTCACCGGGTCTATCTGCCGCTGGCCGCACCGGGGATCGCGGCAGGCTGCATCATGGTGTTTATCCTGTCGGTCGGATACTACGTGACCCCCGCTCTGGTCGGCGGTCCTTCGGACCAGATGTTGTCTGCCTTCGTCGCGAACTACACGACGGGAACCGGCAACTGGGGCCTCGCCTCCGCGCTCGGCCTCATCCTTCTAATCGTAACGATCATCCTGTACCTGCTTGCCCAGAGACTTTCCGGCGGGCGGGCCATCTCGCTGGGATAG
PROTEIN sequence
Length: 211
MVTLACLFLGFPVAVLLTTSSEKVADTILVLVMLPFWTSLLVRTTAWIVLLQKEGIINGVLLSLGLIAEPLTMIFNRTGVVIAMTHVLLPFMILPLYGTLKAIPRGYMRAAASLGARPFTAFHRVYLPLAAPGIAAGCIMVFILSVGYYVTPALVGGPSDQMLSAFVANYTTGTGNWGLASALGLILLIVTIILYLLAQRLSGGRAISLG*