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SCNpilot_expt_1000_bf_scaffold_4376_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7363..8853

Top 3 Functional Annotations

Value Algorithm Source
Carnitine dehydratase {ECO:0000313|EMBL:KJE52541.1}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 490.0
  • Bit_score: 594
  • Evalue 1.40e-166
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037189EC similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 489.0
  • Bit_score: 593
  • Evalue 2.20e-166
  • rbh
aldehyde dehydrogenase family protein similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 495.0
  • Bit_score: 581
  • Evalue 3.60e-163
  • rbh

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Taxonomy

Burkholderia sp. USM B20 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1491
ATGCCTGATTTCCCCCGTTTCGGTATGTTCATCGACAACAAGTTCACGGACGCCATTTCGGGTCGCTGGTTCACCTCGGACGATCCGTCGCGCGGCGTGCCCTGGGCTGAAGTGGCCGCCGGGAGCGCGGACGATGTGGACCGTGCGGTTCATTCGGCGCATCGCGCTTTTCGCGACCCCGAATGGCGGGGCATGAGTGCATCCGACCGCGGGCTGCTGCTGAACCGGCTGGCCGACCTGATAGCCGCCCGGACGGAAGATCTGGCTGTTGCCGAGACTCGCGACAACGGCAAGCTGCTGGCCGAGATGAGGGGCCAGATGGCCTATATGCCGCGCTGGTATCGCTATTATGCCGGGCTGGCGGACAAGGTGGAGGGCGCAGTCCTGCCGGCGGACAAGAAAGACATGATGGCATTCACCCGGCTGGAACCGCTCGGCGTGGTGGCGGCGATCGTGCCGTGGAATTCACCGCTTCTGTTGACGGCATGGAAGCTGGCGCCGGCGCTGGCGGCCGGCAACACCGTGGTGATCAAGCCGTCAGAATTCACGTCGACCTCAATCGCACCGTTTCTGGAACTGGTGCGTGAGGCGGGCTTTCCTCCCGGTGTCGTGAACGCCGTCACCGGCAACGGGCCGGATGTCGGCGCGGCCCTGGTGGAGCATCCGCTGGTGCGGGCGGTCGCTTTCACCGGTGGAGAAGTTGCCGGGATGGCGATCGCGGAAACCGCAGGCCGGCGCCTGATCCCGCTGACGCTGGAGCTCGGCGGGAAGAGCGCCAATATCGTCTTCGAAGACGCCGATATTGCGCGCGCGGTCAACGGCATCGTCGGCGGAATTTTCGCGGCGACCGGACAGACCTGCGTGGCGGGCTCGCGCCTGCTTGTACACCGTTCGATCGCGCAGGAAGTGATCGAAAAAGTGGTCGCATTGGCGCGCAGCGCGCGCATCGGCGATCCGATGGAGGCGGCGACCCAGGTGGGGCCGGTCACCACCGAGGCGCAGATGGGCAAGATTCTGCGCCACATAGAAGACGCCAAGGCCGCCGGGGCCAGCGTTCTGCTCGGTGGGGGACGCGCTGTCGGCGGGATTTGCGACCAGGGCTGGTTCGTGCAGCCCACCATATTCGGCGACGTGCGGCCGGACATGAGGCTCGCGCAGCAGGAGGTGTTCGGCCCCGTGCTTGCCGTGCTCCCCTTCGACACAGAGGAGGAGGCGCTGTCGCTTGCCAATGACACAGACTATGGGCTGGCTGCCGGGGTGTGGACCCGCGATCTCAACCGTGCCCATCGCATGGCTGCCGAGCTGGAGGCGGGTACGGTATGGATCAACACATACCGTACCTCGGGCCCGATGGCGCCCTTCGGCGGCTTCAAGAAATCCGGCCTGGGACGGGAGGGCGGCCGGGCCGCGATCCTGCAATTCCTGCAAATGAAATCCGTGTGGATTGACATGGGCGCCGACGGTCCCCCGCCATTCGTGATGAAGCTGTGA
PROTEIN sequence
Length: 497
MPDFPRFGMFIDNKFTDAISGRWFTSDDPSRGVPWAEVAAGSADDVDRAVHSAHRAFRDPEWRGMSASDRGLLLNRLADLIAARTEDLAVAETRDNGKLLAEMRGQMAYMPRWYRYYAGLADKVEGAVLPADKKDMMAFTRLEPLGVVAAIVPWNSPLLLTAWKLAPALAAGNTVVIKPSEFTSTSIAPFLELVREAGFPPGVVNAVTGNGPDVGAALVEHPLVRAVAFTGGEVAGMAIAETAGRRLIPLTLELGGKSANIVFEDADIARAVNGIVGGIFAATGQTCVAGSRLLVHRSIAQEVIEKVVALARSARIGDPMEAATQVGPVTTEAQMGKILRHIEDAKAAGASVLLGGGRAVGGICDQGWFVQPTIFGDVRPDMRLAQQEVFGPVLAVLPFDTEEEALSLANDTDYGLAAGVWTRDLNRAHRMAAELEAGTVWINTYRTSGPMAPFGGFKKSGLGREGGRAAILQFLQMKSVWIDMGADGPPPFVMKL*