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SCNpilot_expt_1000_bf_scaffold_4376_curated_22

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 21232..21750

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:EYR78521.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 166.0
  • Bit_score: 231
  • Evalue 8.20e-58
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003808CF3 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 164.0
  • Bit_score: 205
  • Evalue 4.50e-50
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 160.0
  • Bit_score: 175
  • Evalue 1.20e-41

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGCCTTCCTACGACAATCGTTTCTCGCATCGGCCCTTGCCGTATCCCTCCTGACATCGGCGGGTGGCGCCGCGGCGCTCGACAAGCCCACCGGCGACGTCATCCTGACGATCACGGCGGAGCGCATCGACCATCCCAATGTCGATGGAACCGCCCAGTTCGACCTTGCCATGCTGGAGGCGCTGGCCGGCCGATCGGGCGAAATGGAGACCCCCTGGACCGAAGGGCGGGTCAAGTTTTCCGGTCCGCTCCTTCGGGCGGTCATCGAGGCCGCCGGTGCGCACGGCACGACGATGAAGGTCAGGGCGATCAACGACTATGCGGCCGACGTCCCGATGGACGACGCGGTCCTGCTCGACACGATCCTTGCGACGCGCATGAACGGCGAAACGATGTCCATTCGCGAGAAGGGCCCCCTGTTCCTCATCTATCCCTTCGACAAGGATCCCGGCCTCTATAACGAGAAGTATTTCTCCCGCTCGGTCTGGCAGATCAAGGCCATCGAGGTCGCCCGGTGA
PROTEIN sequence
Length: 173
MAFLRQSFLASALAVSLLTSAGGAAALDKPTGDVILTITAERIDHPNVDGTAQFDLAMLEALAGRSGEMETPWTEGRVKFSGPLLRAVIEAAGAHGTTMKVRAINDYAADVPMDDAVLLDTILATRMNGETMSIREKGPLFLIYPFDKDPGLYNEKYFSRSVWQIKAIEVAR*