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SCNpilot_expt_1000_bf_scaffold_17105_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5251..5634)

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; S similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 127.0
  • Bit_score: 246
  • Evalue 2.40e-62
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036E1FDF similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 127.0
  • Bit_score: 244
  • Evalue 6.50e-62
kdsA; putative 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55) similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 127.0
  • Bit_score: 242
  • Evalue 5.90e-62

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGAAGAACGTACTGGCGAAGTTCACCGAGAGCGGCAATCCGAACGTGCTGCTCTGCGAGCGCGGCGCCTCTTTCGGCTACAACACGCTCGTCTCCGACATGCGTTCGCTGCCGATCATGGCCGCGCTCGGCGCGCCCGTCGTGTTCGATGCCACCCATTCGGTGCAGCAGCCGGGCGGGCAGGGTGGTTCGACCGGCGGCCAGCGCGAATTCGTCGAGACGCTGGCGCGCGCCGCCGTCGCCGTCGGCATTGCCGGCCTCTTCGTCGAGACGCACGAGGACCCGGACCATGCGCCCTCCGACGGTCCCAACATGGTGCATCTCAAGGACATGCCGCTGCTTCTCGAAAAGCTGCTCGCCTTCGACGCCATCGCCAAGGGCTGA
PROTEIN sequence
Length: 128
MKNVLAKFTESGNPNVLLCERGASFGYNTLVSDMRSLPIMAALGAPVVFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGIAGLFVETHEDPDHAPSDGPNMVHLKDMPLLLEKLLAFDAIAKG*