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SCNpilot_expt_1000_bf_scaffold_8466_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(8312..9142)

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. CF080 RepID=J3BU09_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 276.0
  • Bit_score: 440
  • Evalue 1.30e-120
  • rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KGD94468.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 276.0
  • Bit_score: 440
  • Evalue 1.40e-120
ABC transporter membrane spanning protein (Amino acid) similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 276.0
  • Bit_score: 433
  • Evalue 5.10e-119
  • rbh

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGAGTTTTGTCGAGCGCATGATCCCGCCCCGCCCCGCTCCGGCCGCCAAGGTCCAGTCGATCTCGGCCGCACGCATCGCCGGCATCCTGATGCTGATCGTCTGGGCCCTGCTCGCCGCGGGGCTGGTCTACATGATGATTTCCAACTGGGATACCGACAAGTTCGTCCGTTATGGACCGCGTTACCTCTCCGGCCTGTGGGTGACGGCTTCGCTGGTCAGCCTGTCGATCGTCTTCGGCGCCGCCCTTTCCCTGCCGATCGCCTTTGCCCGCATGTCCGGCAACCGCGTGGCGAACGGCCTCGCCTACGCCTATGTCTACATCTTCCGCGGCACGCCGCTCCTGGCGCAGCTCTACCTGATCTATTATGGCCTCGGCTCTTTCCGACCGCAGCTGGAAGCCGTCGGCCTGTGGTGGTTCTTCCGCGAGGCCTGGTATTGCGGCCTGCTGTCGATGACGCTCAACACCGCCGCCTACCAGGCGGAAATCCTGCGCGGGGCGATCCAGAGCGTGCCGAAGGGGCAGCATGAGGGCGCCCAATCCCTCGGGCTGCCGCCGATGGTAACCTTCCGCAAGATCATCCTGCCGCAGGCGCTCATCGTCGCGTTGCGCCCTTACGGCAACGAGATCATCCTGATGATCAAGGGATCGGCCGTCGTCGCCGTCGTCACGGTGCTCGACCTGATGGGCCAGACGCGCTACGCCTTCTCGCGCACCTTCGATTACCAGGCCTACCTCTGGGCGGCGATCTTCTACCTCTCCATCGTCGAGGTGCTCCGCCATGTCTGGGCGGCGATCGAAGCGCGCCTGACGCGCCATCTCAAGCGCTGA
PROTEIN sequence
Length: 277
MSFVERMIPPRPAPAAKVQSISAARIAGILMLIVWALLAAGLVYMMISNWDTDKFVRYGPRYLSGLWVTASLVSLSIVFGAALSLPIAFARMSGNRVANGLAYAYVYIFRGTPLLAQLYLIYYGLGSFRPQLEAVGLWWFFREAWYCGLLSMTLNTAAYQAEILRGAIQSVPKGQHEGAQSLGLPPMVTFRKIILPQALIVALRPYGNEIILMIKGSAVVAVVTVLDLMGQTRYAFSRTFDYQAYLWAAIFYLSIVEVLRHVWAAIEARLTRHLKR*