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SCNpilot_expt_1000_bf_scaffold_8466_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8466_curated_1
unknown

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comp(1..231)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8466_curated_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(732..2261)
DNA (1530bp) protein (510aa)
Putative two-component sensor histidine kinase protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AGC4_RHIET rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
two-component sensor histidine kinase (EC:2.7.13.3); K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] rbh
SCNpilot_expt_1000_bf_scaffold_8466_curated_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2386..2907
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000381982B
nuclease
Nuclease (SNase domain protein) {ECO:0000313|EMBL:ACS56590.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_expt_1000_bf_scaffold_8466_curated_4
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2904..3530
DNA (627bp) protein (209aa)
Uracil-DNA glycosylase {ECO:0000313|EMBL:KGE80800.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein rbh
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PUX0_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_8466_curated_5
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3602..4090
DNA (489bp) protein (163aa)
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGD94459.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2QY44_9RHIZ rbh
transcriptional regulator AsnC family; K05800 Lrp/AsnC family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_8466_curated_6
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4118..4480)
DNA (363bp) protein (121aa)
Putative DNA alkylation repair enzyme n=1 Tax=Rhizobium sp. CF122 RepID=J2HY32_9RHIZ
Putative DNA alkylation repair enzyme {ECO:0000313|EMBL:EJL48460.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8466_curated_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4538..4816)
DNA (279bp) protein (93aa)
DNA alkylation repair protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000373937D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK08262.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_expt_1000_bf_scaffold_8466_curated_8
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4845..5243)
DNA (399bp) protein (133aa)
UPI0003CE29C9 related cluster n=1 Tax=unknown RepID=UPI0003CE29C9
Uncharacterized protein {ECO:0000313|EMBL:ESY36616.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
TolA protein
SCNpilot_expt_1000_bf_scaffold_8466_curated_9
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5240..6112)
DNA (873bp) protein (291aa)
NAD-binding 6-phosphogluconate dehydrogenase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HH88_9RHIZ
NAD-binding 6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:EPE98202.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
NAD-binding 6-phosphogluconate dehydrogenase
SCNpilot_expt_1000_bf_scaffold_8466_curated_10
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6224..6880)
DNA (657bp) protein (219aa)
Putative methyltransferase (Contains TPR repeat) n=1 Tax=Rhizobium sp. CF080 RepID=J2RY37_9RHIZ
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:EUB95746.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
methyltransferase (EC:2.1.1.-)
SCNpilot_expt_1000_bf_scaffold_8466_curated_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7161..7880
DNA (720bp) protein (240aa)
putative transmembrane protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:AHK44559.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Putative transmembrane protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MDG7_RHISN rbh
SCNpilot_expt_1000_bf_scaffold_8466_curated_12
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7886..8152)
DNA (267bp) protein (89aa)
Phosphoribosylanthranilate isomerase subunit Usg protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HYR7_9RHIZ
Putative phosphoribosylanthranilate isomerase subunit Usg protein {ECO:0000313|EMBL:CDM57877.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
aromatic amino acid biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_8466_curated_13
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8312..9142)
DNA (831bp) protein (277aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. CF080 RepID=J3BU09_9RHIZ rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KGD94468.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
ABC transporter membrane spanning protein (Amino acid) rbh
SCNpilot_expt_1000_bf_scaffold_8466_curated_14
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9139..9942)
DNA (804bp) protein (268aa)
ABC-type arginine transport system, permease component n=1 Tax=Rhizobium sp. CF122 RepID=J2IIF3_9RHIZ rbh
ABC-type arginine transport system, permease component {ECO:0000313|EMBL:EJL48478.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
ABC transporter membrane spanning protein (amino acid); K02029 polar amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_8466_curated_15
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10066..10848)
DNA (783bp) protein (261aa)
Arginine-binding periplasmic protein 2
Main chromosome, complete sequence n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A765_RHIFH
Main chromosome, complete sequence {ECO:0000313|EMBL:CCE96095.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Displaying 15 items

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