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SCNpilot_expt_1000_bf_scaffold_5731_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 8574..9299

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CK27_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 220.0
  • Bit_score: 259
  • Evalue 3.70e-66
GntR family transcriptional regulator {ECO:0000313|EMBL:EFO31213.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 220.0
  • Bit_score: 259
  • Evalue 5.10e-66
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 227.0
  • Bit_score: 215
  • Evalue 1.50e-53

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Taxonomy

Roseibium sp. TrichSKD4 → Roseibium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGAATAGCCAGATCGAACAGCAGAACGATTGGTCCGATGAGATCGCACCCTTGCCCAAGCGCGACAGCCTCGCCAAGGAGGCCGCCGACAGGCTGCGCGAGCTGATCCTCCTTGAAAAGATCGGCGCCGGCGCCGCGATCCCCGAGCGGGAGCTTTCCGACGCGCTCGGGATCAGCCGCACGCCCATGCGCGAGGCCCTGCGGCTGCTCGAGATCGAGGGGCTGGTGGAGTTCACCGCCACGCGCCGCGTGCGGGTCGCCGATCCCTCGCTCGACGAGCTGGAGCAGCACCTGACCGTGCTCGGCGCACTGGAGGGCCTGTGCGGCGAACTTGCCTGCGTCCACGCGACGAATGCGGAGATCGCGCGCATCAACGACCTCAACGAGACCATGCTCGCCGGAAGCGACACGATGGAGCCGCTCGACTTCTTCCGCACCGACATGGCCTTTCACCGCACCATCGTCGAGGCGAGCCGCAATGCGCCGCTGATGGAGACGCACCGGCAATACAACGCCCGGCTCTGGCGGGCGCGGTTCATCTCCTCGCGCCGCCGGCCGGACCGGGCCGGCACCCTGTCGCAGCACAGCGATATCGCCGCCGCCATCACCCGGCGCGATCCCGCGGCGAGCACGGCCGCGCTGCGGGGGCACCTGCGGTCCACCATCGTCAATATCGGCAAGTCCTGGAGCGAGCGGCACAGTCTCGCCGGGCCCGCCGAGCCGTGA
PROTEIN sequence
Length: 242
MNSQIEQQNDWSDEIAPLPKRDSLAKEAADRLRELILLEKIGAGAAIPERELSDALGISRTPMREALRLLEIEGLVEFTATRRVRVADPSLDELEQHLTVLGALEGLCGELACVHATNAEIARINDLNETMLAGSDTMEPLDFFRTDMAFHRTIVEASRNAPLMETHRQYNARLWRARFISSRRRPDRAGTLSQHSDIAAAITRRDPAASTAALRGHLRSTIVNIGKSWSERHSLAGPAEP*