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SCNpilot_expt_1000_bf_scaffold_8953_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2447..2956)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 170.0
  • Bit_score: 181
  • Evalue 2.10e-43
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K509_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 170.0
  • Bit_score: 181
  • Evalue 6.80e-43
Uncharacterized protein {ECO:0000313|EMBL:ACM39957.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 170.0
  • Bit_score: 181
  • Evalue 9.60e-43

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGAACCCTATCGTTCCGGCCATGATGGCCTGCTGTGTGCCGCTCCTGTTCTCCACGCCGGCAAATGCCGGAGAAGAGCAGTTTCTGGGGAGCCTGAAGGGTGAATATGCTGGCAAGGGCGAGGTGCGGCTGCGCACCAACAAGGCGCCCATCGGCGTCAGTTGCCGGTTCACCTCCGCCACCACCGGAAGCTCGTTGTCCCTGAAGGGGCGGTGCCGCGGCCTGGTCGTCGTGTCGCGGGCGGTCGGCGTCGACCTGAAGATCTCGGGCGGCACCTATCGCGGATCCTATATCGGGGCCGGCTCCGGGCCGGCATCGCTGTCCGGCCGGCGCAAGGGCGATACGCTGAACCTTGCCATCGGCTGGGCAAAGGCGGTGAACGGCGACCGGCGCGCCAATCTTTCCCTTGCCAAGGCCGGGAAGAACGGCCTGACGCTCACGACGACGGACCGCGATCCCGCTTCCGGCAAGATGGTGACGACGAGCCGGATCACGCTCCAGCGCCAGTAG
PROTEIN sequence
Length: 170
MNPIVPAMMACCVPLLFSTPANAGEEQFLGSLKGEYAGKGEVRLRTNKAPIGVSCRFTSATTGSSLSLKGRCRGLVVVSRAVGVDLKISGGTYRGSYIGAGSGPASLSGRRKGDTLNLAIGWAKAVNGDRRANLSLAKAGKNGLTLTTTDRDPASGKMVTTSRITLQRQ*